Os10g0205900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0205900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.75 | 0.348 | 10.7 | -2.17 | 0.699 | 1.2 | 0.741 | -0.402 | -0.279 | 5.46 | 15.29 | 1443 | -- | -- |
| 54.87 | 0.345 | 10.7 | -2.08 | 0.694 | 1.22 | 0.725 | -- | -0.254 | 5.48 | 14.73 | 1433 | -- | -- |
| 56.08 | 0.349 | 10.7 | -2.14 | 0.699 | 1.18 | -- | -0.299 | -0.277 | 5.54 | 15.56 | 1424 | -- | -- |
| 56.14 | 0.349 | 10.7 | -2.08 | 0.698 | 1.22 | -- | -- | -0.254 | 5.55 | 14.75 | 1416 | -- | -- |
| 80.23 | 0.417 | 10.7 | -2.11 | -- | 1.34 | -- | -0.127 | -0.26 | -- | 14.9 | 1314 | -- | -- |
| 80.63 | 0.421 | 10.6 | -1.69 | 0.746 | -- | 0.748 | -- | -0.0287 | 5.26 | -- | -- | -- | -- |
| 82.02 | 0.424 | 10.6 | -1.69 | 0.751 | -- | -- | -- | -0.0321 | 5.31 | -- | -- | -- | -- |
| 80.24 | 0.417 | 10.7 | -2.08 | -- | 1.34 | -- | -- | -0.26 | -- | 14.76 | 1314 | -- | -- |
| 154.54 | 0.579 | 10.6 | -- | 0.706 | 0.373 | -- | -- | 0.0968 | 5.58 | 13.03 | 1234 | -- | -- |
| 111.44 | 0.493 | 10.6 | -1.66 | -- | -- | -- | -- | -0.0134 | -- | -- | -- | -- | -- |
| 157.06 | 0.586 | 10.6 | -- | 0.722 | -- | -- | -- | 0.156 | 5.4 | -- | -- | -- | -- |
| 177.34 | 0.62 | 10.6 | -- | -- | 0.373 | -- | -- | 0.203 | -- | 27.9 | 1294 | -- | -- |
| 184.26 | 0.634 | 10.6 | -- | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.14 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 2 | 53.20 | temperature | 15 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 4 | 53.46 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 5 | 53.47 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 13 | 53.58 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 7 |
| 68 | 54.01 | temperature | 10 | 1440 | > th | dose dependent | sin | 5 | NA |
| 202 | 54.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 16 |
| 244 | 54.53 | temperature | 30 | 1440 | < th | dose dependent | sin | 6 | NA |
| 358 | 54.75 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 360 | 54.75 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 396 | 54.80 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 435 | 54.84 | temperature | 15 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 720 | 55.37 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 723 | 55.38 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 836 | 55.54 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 23 |