Os10g0199500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF6, transmembrane domain containing protein.
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Os10g0199500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF6, transmembrane domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.28 | 0.489 | 2.84 | -0.896 | 0.00816 | -13.9 | -0.249 | -65.8 | 0.0057 | 20.1 | 9.486 | 23 | -- | -- |
| 394.84 | 0.925 | 2.73 | -0.545 | 0.067 | -10.1 | 1.34 | -- | 0.514 | 23.7 | 10.04 | 52 | -- | -- |
| 107.98 | 0.484 | 2.84 | -0.929 | 0.00354 | -14.8 | -- | -70 | -0.000282 | 16.4 | 9.544 | 28 | -- | -- |
| 136.77 | 0.545 | 3 | -0.384 | 0.0308 | 1.19 | -- | -- | -0.0562 | 13.9 | 9.354 | 40 | -- | -- |
| 107.96 | 0.484 | 2.84 | -0.94 | -- | -15.2 | -- | -71.6 | -0.000935 | -- | 9.546 | 28 | -- | -- |
| 139.53 | 0.554 | 2.99 | -0.458 | 0.0746 | -- | -0.686 | -- | -0.0342 | 17.2 | -- | -- | -- | -- |
| 140.71 | 0.555 | 2.99 | -0.458 | 0.071 | -- | -- | -- | -0.0373 | 16.5 | -- | -- | -- | -- |
| 119.2 | 0.508 | 3 | -0.493 | -- | 2.44 | -- | -- | 0.0472 | -- | 10.32 | 17 | -- | -- |
| 110.78 | 0.49 | 2.98 | -- | 0.00656 | 5.85 | -- | -- | 0.0318 | 18.7 | 10.4 | 17 | -- | -- |
| 140.98 | 0.555 | 2.99 | -0.461 | -- | -- | -- | -- | -0.0392 | -- | -- | -- | -- | -- |
| 146.23 | 0.566 | 2.98 | -- | 0.0796 | -- | -- | -- | 0.0137 | 16.3 | -- | -- | -- | -- |
| 110.78 | 0.49 | 2.98 | -- | -- | 5.86 | -- | -- | 0.0323 | -- | 10.4 | 17 | -- | -- |
| 146.57 | 0.565 | 2.98 | -- | -- | -- | -- | -- | 0.0119 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.64 | wind | 9 | 10 | > th | dose independent | rect. | 13 | 3 |
| 5 | 99.53 | wind | 9 | 10 | > th | dose dependent | rect. | 13 | 3 |
| 35 | 105.92 | wind | 9 | 30 | > th | dose dependent | rect. | 13 | 9 |
| 70 | 106.97 | wind | 9 | 10 | > th | dose independent | rect. | 15 | 1 |
| 78 | 106.97 | wind | 9 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 144 | 111.51 | wind | 9 | 30 | > th | dose independent | rect. | 13 | 9 |
| 174 | 111.65 | wind | 9 | 30 | > th | dose dependent | rect. | 15 | 7 |
| 219 | 113.09 | wind | 9 | 30 | > th | dose dependent | sin | 15 | NA |
| 293 | 117.23 | wind | 9 | 30 | > th | dose independent | rect. | 15 | 7 |
| 431 | 121.68 | wind | 9 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 436 | 121.78 | wind | 9 | 10 | > th | dose dependent | rect. | 10 | 6 |
| 476 | 122.48 | wind | 9 | 30 | > th | dose independent | sin | 15 | NA |
| 614 | 125.18 | humidity | 70 | 10 | < th | dose independent | rect. | 12 | 21 |
| 618 | 125.20 | wind | 9 | 30 | < th | dose independent | sin | 15 | NA |
| 645 | 125.55 | wind | 9 | 30 | > th | dose dependent | rect. | 10 | 12 |
| 684 | 125.59 | wind | 9 | 30 | > th | dose dependent | no | NA | NA |
| 730 | 125.59 | wind | 9 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 844 | 126.37 | humidity | 70 | 10 | < th | dose independent | rect. | 15 | 17 |