Os10g0198300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0198300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.58 | 0.424 | 12.9 | -1.49 | 2.15 | 3.1 | -0.967 | -14.2 | -0.486 | 21.1 | 0.228 | 677 | -- | -- |
| 90.52 | 0.447 | 12.8 | -1.3 | 2.12 | -0.769 | -0.958 | -- | -0.5 | 21.1 | 0.228 | 677 | -- | -- |
| 84.74 | 0.429 | 12.9 | -1.47 | 2.15 | 3.07 | -- | -14.4 | -0.494 | 21.1 | 0.2945 | 671 | -- | -- |
| 89.94 | 0.442 | 12.8 | -1.17 | 2.15 | -0.813 | -- | -- | -0.516 | 21.1 | 0.2027 | 761 | -- | -- |
| 342.87 | 0.862 | 13 | -1.66 | -- | 3.67 | -- | -15.6 | -0.509 | -- | 0.3496 | 1268 | -- | -- |
| 91.15 | 0.448 | 12.8 | -1.31 | 2.12 | -- | -0.97 | -- | -0.498 | 21.1 | -- | -- | -- | -- |
| 94.41 | 0.455 | 12.8 | -1.27 | 2.13 | -- | -- | -- | -0.497 | 21.1 | -- | -- | -- | -- |
| 351.3 | 0.873 | 12.8 | -1.18 | -- | -0.606 | -- | -- | -0.526 | -- | -0.02226 | 1205 | -- | -- |
| 118.83 | 0.508 | 12.8 | -- | 2.16 | -1.06 | -- | -- | -0.45 | 21.1 | 0.2221 | 2209 | -- | -- |
| 355.05 | 0.88 | 12.8 | -1.27 | -- | -- | -- | -- | -0.51 | -- | -- | -- | -- | -- |
| 137.22 | 0.548 | 12.8 | -- | 2.13 | -- | -- | -- | -0.355 | 21 | -- | -- | -- | -- |
| 380.25 | 0.908 | 12.8 | -- | -- | -0.981 | -- | -- | -0.473 | -- | -0.1899 | 2721 | -- | -- |
| 397.61 | 0.931 | 12.7 | -- | -- | -- | -- | -- | -0.369 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.90 | temperature | 15.0 | 720 | > th | dose independent | rect. | 9 | 7 |
| 2 | 78.90 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 4 | 2 |
| 4 | 79.27 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 6 | 79.37 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 8 | 79.53 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 23 | 18 |
| 11 | 79.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 14 | 79.88 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 15 | 79.88 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 16 | 79.89 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 20 | 79.95 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 24 | 20 |
| 21 | 79.96 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 23 | 18 |
| 23 | 80.01 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 24 | 20 |
| 28 | 80.05 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 4 | 18 |
| 41 | 80.23 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 20 |
| 42 | 80.23 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 20 |
| 52 | 80.35 | precipitation | 0.1 | 720 | > th | dose independent | sin | 3 | NA |
| 60 | 80.42 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 17 |
| 63 | 80.42 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 17 |
| 73 | 80.48 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 1 | 6 |
| 78 | 80.50 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 22 |
| 108 | 80.66 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 16 | 17 |
| 110 | 80.66 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 16 | 17 |
| 128 | 80.75 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 4 | 13 |
| 130 | 80.75 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 4 | 13 |
| 142 | 80.81 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 13 |
| 148 | 80.87 | precipitation | 0.1 | 720 | > th | dose dependent | sin | 3 | NA |
| 158 | 80.92 | temperature | 15.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 162 | 80.94 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 165 | 80.94 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 183 | 80.99 | precipitation | 0.1 | 1440 | < th | dose independent | sin | 2 | NA |
| 184 | 80.99 | precipitation | 0.1 | 1440 | < th | dose dependent | sin | 2 | NA |
| 208 | 81.11 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 1 | 15 |
| 209 | 81.11 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 16 |
| 210 | 81.11 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 211 | 81.11 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 16 |
| 231 | 81.18 | temperature | 15.0 | 720 | > th | dose independent | rect. | 3 | 19 |
| 241 | 81.24 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 7 | 8 |
| 246 | 81.25 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 13 |
| 256 | 81.29 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 8 | 11 |
| 262 | 81.31 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 12 |
| 267 | 81.32 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 278 | 81.35 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 21 |
| 280 | 81.36 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 281 | 81.36 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 7 | 12 |
| 287 | 81.38 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 288 | 81.38 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 292 | 81.41 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 294 | 81.41 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 298 | 81.43 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 299 | 81.43 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 8 |
| 302 | 81.43 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 304 | 81.43 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 8 |
| 307 | 81.44 | temperature | 15.0 | 720 | > th | dose independent | rect. | 19 | 16 |
| 319 | 81.49 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 8 | 6 |
| 328 | 81.50 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 14 | 21 |
| 339 | 81.56 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 341 | 81.57 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 14 |
| 345 | 81.57 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 14 |
| 349 | 81.58 | temperature | 15.0 | 720 | > th | dose independent | rect. | 3 | 4 |
| 352 | 81.59 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 383 | 81.67 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 15 |
| 384 | 81.67 | temperature | 15.0 | 720 | > th | dose independent | rect. | 9 | 22 |
| 387 | 81.67 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 15 |
| 399 | 81.70 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 8 | 9 |
| 414 | 81.74 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 417 | 81.74 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 470 | 81.83 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 473 | 81.84 | precipitation | 0.1 | 720 | > th | dose dependent | no | NA | NA |
| 476 | 81.84 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 485 | 81.87 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 23 | 6 |
| 487 | 81.87 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 514 | 81.91 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 550 | 81.96 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 554 | 81.96 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 567 | 81.98 | temperature | 15.0 | 720 | > th | dose independent | rect. | 3 | 12 |
| 571 | 81.98 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 574 | 81.98 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 24 | 11 |
| 579 | 81.98 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 580 | 81.99 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 581 | 81.99 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 23 | 6 |
| 582 | 81.99 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 592 | 82.00 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 18 | 19 |
| 595 | 82.01 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 596 | 82.01 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 11 |
| 604 | 82.01 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 4 | 20 |
| 611 | 82.02 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 636 | 82.04 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 637 | 82.05 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 655 | 82.07 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 18 | 17 |
| 659 | 82.08 | radiation | 30.0 | 720 | < th | dose independent | rect. | 7 | 2 |
| 681 | 82.10 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 697 | 82.12 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 16 | 9 |
| 700 | 82.12 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 16 | 9 |
| 752 | 82.18 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 758 | 82.18 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 18 | 23 |
| 760 | 82.18 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 767 | 82.19 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 772 | 82.20 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 800 | 82.23 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 9 | 11 |
| 809 | 82.25 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 810 | 82.25 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 12 |
| 838 | 82.28 | wind | 3.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 878 | 82.32 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 22 | 16 |
| 890 | 82.34 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 895 | 82.34 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 14 | 23 |
| 913 | 82.37 | wind | 9.0 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 923 | 82.38 | wind | 3.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 957 | 82.41 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 963 | 82.41 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 983 | 82.43 | temperature | 30.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 985 | 82.43 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 15 | 4 |