Os10g0197700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF6, transmembrane domain containing protein.
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Os10g0197700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF6, transmembrane domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 192.49 | 0.652 | 2.94 | 1.03 | 0.0945 | -0.267 | 0.882 | 5.84 | -0.222 | 18.1 | 30 | 2879 | -- | -- |
| 196.21 | 0.652 | 3.07 | -0.0879 | 0.0947 | 0.371 | 0.84 | -- | -0.27 | 17.9 | 31.99 | 5271 | -- | -- |
| 194.04 | 0.649 | 2.94 | 1 | 0.102 | -0.287 | -- | 6.02 | -0.243 | 17.2 | 30.39 | 2817 | -- | -- |
| 197.6 | 0.655 | 3.07 | -0.0985 | 0.0877 | 0.406 | -- | -- | -0.258 | 15.2 | 32.08 | 5210 | -- | -- |
| 193.23 | 0.647 | 2.94 | 0.987 | -- | -0.385 | -- | 7.09 | -0.277 | -- | 31.2 | 2366 | -- | -- |
| 202.86 | 0.668 | 3.09 | 0.0207 | 0.0544 | -- | 0.826 | -- | -0.339 | 18.7 | -- | -- | -- | -- |
| 204.53 | 0.67 | 3.08 | 0.00831 | 0.0662 | -- | -- | -- | -0.336 | 16.9 | -- | -- | -- | -- |
| 197.92 | 0.655 | 3.07 | -0.102 | -- | 0.416 | -- | -- | -0.263 | -- | 32.03 | 5095 | -- | -- |
| 197.37 | 0.654 | 3.06 | -- | 0.0894 | 0.453 | -- | -- | -0.263 | 14.9 | 31.91 | 3741 | -- | -- |
| 204.76 | 0.669 | 3.08 | 0.00585 | -- | -- | -- | -- | -0.338 | -- | -- | -- | -- | -- |
| 204.53 | 0.669 | 3.08 | -- | 0.0661 | -- | -- | -- | -0.337 | 16.9 | -- | -- | -- | -- |
| 197.81 | 0.655 | 3.06 | -- | -- | 0.471 | -- | -- | -0.253 | -- | 31.92 | 3740 | -- | -- |
| 204.76 | 0.668 | 3.08 | -- | -- | -- | -- | -- | -0.338 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 188.54 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 18 | 14 |
| 2 | 189.58 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 3 | 189.58 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 5 | 189.86 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 6 | 189.86 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 7 | 190.33 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 18 | 3 |
| 9 | 190.56 | radiation | 1.0 | 10 | > th | dose independent | rect. | 18 | 1 |
| 20 | 190.71 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 21 | 190.84 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 23 | 190.89 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 6 |
| 26 | 190.96 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 27 | 190.96 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 18 |
| 36 | 191.04 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 38 | 191.04 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 24 | 13 |
| 43 | 191.07 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 81 | 191.24 | wind | 7.0 | 10 | < th | dose independent | rect. | 19 | 23 |
| 87 | 191.29 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 19 | 14 |
| 106 | 191.52 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 132 | 191.65 | atmosphere | 995.0 | 720 | < th | dose independent | rect. | 14 | 1 |
| 174 | 191.65 | atmosphere | 995.0 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 218 | 191.75 | temperature | 30.0 | 1440 | < th | dose independent | sin | 9 | NA |
| 220 | 191.78 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 225 | 191.88 | temperature | 30.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 226 | 191.88 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 15 | 15 |
| 229 | 191.89 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 24 | 8 |
| 235 | 191.91 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 243 | 191.91 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 268 | 191.96 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 22 | 10 |
| 269 | 191.96 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 10 |
| 277 | 191.99 | temperature | 25.0 | 30 | > th | dose independent | rect. | 1 | 1 |
| 279 | 191.99 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 24 | 8 |
| 281 | 191.99 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 288 | 192.01 | humidity | 60.0 | 10 | < th | dose independent | rect. | 18 | 1 |
| 309 | 192.04 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 5 |
| 317 | 192.09 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 18 | 20 |
| 327 | 192.11 | wind | 5.0 | 30 | < th | dose independent | rect. | 6 | 9 |
| 367 | 192.18 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 387 | 192.25 | humidity | 70.0 | 90 | < th | dose dependent | rect. | 19 | 1 |
| 405 | 192.27 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 22 | 3 |
| 406 | 192.28 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 407 | 192.28 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 413 | 192.28 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 417 | 192.29 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 18 | 1 |
| 432 | 192.30 | wind | 5.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 436 | 192.31 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 22 | 7 |
| 499 | 192.43 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 526 | 192.50 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 548 | 192.54 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 572 | 192.59 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 21 | 5 |
| 602 | 192.68 | atmosphere | 995.0 | 720 | < th | dose independent | sin | 6 | NA |
| 611 | 192.70 | temperature | 30.0 | 1440 | > th | dose dependent | sin | 7 | NA |
| 632 | 192.77 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 21 | 10 |
| 644 | 192.80 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 651 | 192.82 | humidity | 90.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 673 | 192.87 | wind | 5.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 720 | 192.92 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 738 | 192.94 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 18 |
| 743 | 192.95 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 744 | 192.95 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 10 |
| 769 | 193.00 | wind | 5.0 | 720 | > th | dose independent | rect. | 4 | 1 |
| 773 | 193.00 | wind | 5.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 780 | 193.02 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 794 | 193.04 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 802 | 193.05 | radiation | 40.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 824 | 193.05 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 879 | 193.10 | wind | 7.0 | 90 | < th | dose independent | rect. | 6 | 18 |
| 913 | 193.15 | wind | 1.0 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 916 | 193.15 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 18 | 14 |
| 925 | 193.16 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 18 | 9 |
| 937 | 193.18 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 957 | 193.21 | wind | 5.0 | 10 | < th | dose dependent | rect. | 15 | 5 |
| 968 | 193.22 | radiation | 10.0 | 90 | > th | dose dependent | rect. | 17 | 14 |
| 973 | 193.23 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 6 |