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Os10g0196000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cytochrome P450 98A1 (EC 1.14.-.-).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.5 (0.0748) R2 : 0.683
β1 : -6.77 (0.278) R2dD : 0.45 R2D : 0.311
β2 : 2.04 (0.182) R2dC : 0.09 R2C : 0.0463
β3 : -4.82 (0.232) R2dE : 0.325 R2E : 0.159
β4 : 2.75 (0.71) R2dD*C : 0.00922 R2D*C : -0.0107
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.671 (0.162) R2dN8 : 0.0177 R2N8 : -0.0366
σ : 1.39
deviance : 892.94
__
_____
C
peak time of C : 9.97
E
wheather : humidity
threshold : 73
memory length : 1301
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
878.96 1.39 8.46 -6.41 2.04 -4.7 2.82 -2.56 -0.592 9.91 73 1306 -- --
892.94 1.39 8.5 -6.77 2.04 -4.82 2.75 -- -0.671 9.97 73 1301 -- --
909.19 1.4 8.47 -6.37 2.03 -4.69 -- -2.11 -0.602 10 72.92 1303 -- --
918.64 1.41 8.51 -6.7 2.03 -4.8 -- -- -0.698 10 72.97 1300 -- --
1078.6 1.53 8.5 -6.22 -- -4.54 -- -2.74 -0.52 -- 72.4 1445 -- --
1717.08 1.94 8.37 -5.86 1.74 -- 2.46 -- -0.0533 8.43 -- -- -- --
1736.1 1.95 8.37 -5.78 1.74 -- -- -- -0.0526 8.53 -- -- -- --
1095.1 1.54 8.55 -6.66 -- -4.67 -- -- -0.648 -- 72.47 1435 -- --
2043.33 2.11 8.33 -- 1.91 -4.27 -- -- 0.0964 9.96 74.34 1323 -- --
1904.91 2.04 8.41 -5.77 -- -- -- -- -0.0363 -- -- -- -- --
2616.05 2.39 8.22 -- 1.72 -- -- -- 0.591 8.78 -- -- -- --
2202.39 2.19 8.38 -- -- -4.05 -- -- 0.145 -- 75 1455 -- --
2783.5 2.46 8.27 -- -- -- -- -- 0.604 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 897.22 humidity 60 1440 > th dose dependent rect. 6 17
48 915.40 humidity 60 1440 > th dose dependent sin 21 NA
58 916.51 humidity 50 1440 > th dose dependent sin 18 NA
93 921.46 humidity 50 1440 > th dose dependent rect. 11 22
127 924.25 humidity 80 1440 < th dose independent rect. 6 15
157 927.20 humidity 50 1440 > th dose dependent rect. 13 10
172 928.54 temperature 30 14400 > th dose dependent rect. 15 4
187 928.60 humidity 90 1440 < th dose dependent rect. 13 20
195 928.90 humidity 90 1440 < th dose dependent rect. 4 19
198 929.43 humidity 70 14400 < th dose independent rect. 18 2
202 929.61 humidity 70 14400 < th dose independent rect. 18 13
222 930.26 temperature 30 14400 > th dose dependent sin 13 NA
227 930.51 humidity 50 1440 > th dose dependent no NA NA
233 930.82 humidity 80 1440 > th dose independent rect. 6 15
237 931.01 humidity 90 1440 < th dose dependent rect. 11 22
256 931.96 humidity 70 14400 < th dose independent rect. 18 4
268 932.10 humidity 70 1440 > th dose independent sin 18 NA
273 932.33 humidity 90 1440 < th dose dependent rect. 15 8
311 933.67 humidity 70 1440 > th dose independent rect. 9 18
316 933.73 humidity 90 1440 < th dose dependent sin 17 NA
317 933.75 humidity 70 1440 > th dose independent rect. 9 16
319 933.76 humidity 70 1440 > th dose independent rect. 9 12
371 935.04 humidity 50 1440 > th dose dependent rect. 15 23
454 938.48 humidity 90 1440 < th dose dependent rect. 15 23
500 940.11 temperature 30 14400 < th dose independent rect. 16 1
510 940.54 radiation 40 1440 < th dose dependent rect. 16 15
530 941.69 humidity 90 1440 < th dose dependent no NA NA
532 941.70 temperature 30 14400 < th dose independent rect. 16 15
533 941.72 temperature 30 14400 < th dose independent rect. 16 13
535 941.73 temperature 30 14400 < th dose independent rect. 16 5
536 941.73 temperature 30 14400 < th dose independent rect. 16 11
540 941.79 temperature 30 14400 < th dose independent rect. 16 3
544 941.82 temperature 30 14400 < th dose independent rect. 16 9
550 942.00 temperature 30 14400 > th dose independent rect. 15 4
568 942.15 humidity 50 1440 > th dose dependent rect. 18 23
627 943.18 humidity 70 14400 > th dose independent rect. 18 13
629 943.32 temperature 30 14400 > th dose independent rect. 16 1
632 943.57 humidity 70 1440 > th dose independent rect. 18 23
633 943.61 temperature 30 14400 > th dose independent sin 14 NA
643 943.99 humidity 70 1440 > th dose independent rect. 13 23
647 944.16 humidity 90 1440 < th dose dependent rect. 10 13
648 944.19 temperature 30 14400 < th dose independent sin 13 NA
655 944.41 humidity 70 1440 < th dose independent sin 17 NA
696 944.97 humidity 70 14400 > th dose independent rect. 18 9
701 945.02 humidity 70 14400 > th dose independent rect. 18 5
730 945.98 temperature 30 14400 < th dose independent rect. 10 21
731 945.99 temperature 30 14400 < th dose independent rect. 10 17
734 946.00 temperature 30 14400 < th dose independent rect. 10 11
737 946.01 temperature 30 14400 < th dose independent rect. 10 9
738 946.01 temperature 30 14400 < th dose independent rect. 10 15
745 946.08 temperature 30 14400 > th dose independent rect. 10 9
770 946.37 radiation 30 1440 < th dose independent rect. 15 17
779 946.72 temperature 30 14400 < th dose independent rect. 14 22
831 947.24 radiation 30 1440 > th dose independent rect. 15 17
835 947.32 humidity 70 1440 > th dose independent rect. 24 21
847 947.43 humidity 70 1440 > th dose independent rect. 2 23
857 947.48 humidity 70 1440 > th dose independent no NA NA
946 948.17 temperature 30 1440 < th dose independent rect. 11 3
965 948.35 temperature 30 14400 > th dose independent rect. 14 22