Os10g0194200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cinnamyl alcohol dehydrogenase (EC 1.1.1.195).
FiT-DB / Search/ Help/ Sample detail
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Os10g0194200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cinnamyl alcohol dehydrogenase (EC 1.1.1.195).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.17 | 0.262 | 12.4 | -0.782 | 0.0412 | 0.332 | 0.309 | -2.33 | -0.221 | 21.3 | 21.1 | 1479 | -- | -- |
| 36.24 | 0.28 | 12.3 | -0.0713 | 0.0382 | 0.164 | 0.319 | -- | -0.0168 | 20.3 | 19.15 | 5665 | -- | -- |
| 31.5 | 0.261 | 12.4 | -0.779 | 0.0437 | 0.329 | -- | -2.3 | -0.211 | 21.5 | 21.1 | 1503 | -- | -- |
| 35.64 | 0.278 | 12.3 | -0.117 | 0.0298 | 0.361 | -- | -- | -0.0443 | 9.04 | 14.7 | 827 | -- | -- |
| 31.59 | 0.262 | 12.4 | -0.792 | -- | 0.331 | -- | -2.32 | -0.221 | -- | 21.1 | 1517 | -- | -- |
| 37.05 | 0.285 | 12.3 | 0.00497 | 0.0454 | -- | 0.297 | -- | 0.0241 | 21 | -- | -- | -- | -- |
| 37.23 | 0.286 | 12.3 | -0.00728 | 0.0617 | -- | -- | -- | 0.0227 | 0.318 | -- | -- | -- | -- |
| 35.62 | 0.278 | 12.3 | -0.1 | -- | 0.331 | -- | -- | -0.0327 | -- | 13.97 | 1037 | -- | -- |
| 35.75 | 0.278 | 12.3 | -- | 0.0603 | 0.316 | -- | -- | -0.0146 | 5.76 | 15.19 | 651 | -- | -- |
| 37.47 | 0.286 | 12.3 | -0.00522 | -- | -- | -- | -- | 0.0236 | -- | -- | -- | -- | -- |
| 37.23 | 0.285 | 12.3 | -- | 0.0616 | -- | -- | -- | 0.0235 | 0.312 | -- | -- | -- | -- |
| 35.86 | 0.279 | 12.3 | -- | -- | 0.293 | -- | -- | -0.0156 | -- | 14.05 | 995 | -- | -- |
| 37.47 | 0.286 | 12.3 | -- | -- | -- | -- | -- | 0.0242 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.63 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 2 | 28.63 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 7 | 28.86 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 13 |
| 22 | 29.29 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 23 | 29.36 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 9 |
| 33 | 29.43 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 4 |
| 35 | 29.44 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 51 | 29.52 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 64 | 29.60 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 89 | 29.68 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 91 | 29.68 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 169 | 29.94 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 206 | 30.06 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 231 | 30.14 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 264 | 30.23 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 310 | 30.34 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 16 |
| 316 | 30.36 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 345 | 30.42 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 3 |
| 353 | 30.43 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 6 |
| 377 | 30.46 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 381 | 30.47 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 393 | 30.47 | humidity | 50 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 401 | 30.48 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 428 | 30.52 | humidity | 90 | 43200 | > th | dose dependent | sin | 4 | NA |
| 429 | 30.52 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 440 | 30.53 | humidity | 90 | 43200 | > th | dose dependent | rect. | 1 | 13 |
| 446 | 30.54 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 11 |
| 469 | 30.56 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 495 | 30.57 | wind | 3 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 531 | 30.59 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 8 |
| 540 | 30.59 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 17 |
| 541 | 30.60 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 548 | 30.60 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 6 |
| 568 | 30.61 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 593 | 30.62 | radiation | 40 | 90 | < th | dose independent | rect. | 12 | 23 |
| 594 | 30.62 | humidity | 70 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 607 | 30.63 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 609 | 30.63 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 619 | 30.63 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 22 |
| 645 | 30.65 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 665 | 30.66 | radiation | 1 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 666 | 30.66 | radiation | 1 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 673 | 30.66 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 16 |
| 679 | 30.67 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 680 | 30.67 | radiation | 10 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 692 | 30.67 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 708 | 30.67 | humidity | 90 | 43200 | > th | dose dependent | rect. | 1 | 23 |
| 715 | 30.68 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 2 |
| 717 | 30.68 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 719 | 30.68 | humidity | 70 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 738 | 30.68 | humidity | 90 | 43200 | > th | dose dependent | rect. | 11 | 23 |
| 811 | 30.70 | humidity | 90 | 43200 | > th | dose dependent | rect. | 9 | 23 |
| 814 | 30.71 | wind | 1 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 840 | 30.72 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 843 | 30.72 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 20 |
| 866 | 30.73 | temperature | 20 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 879 | 30.74 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 5 |
| 881 | 30.74 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 18 |
| 883 | 30.74 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 21 |
| 898 | 30.74 | humidity | 80 | 43200 | > th | dose dependent | rect. | 5 | 19 |
| 945 | 30.76 | radiation | 1 | 43200 | < th | dose independent | sin | 9 | NA |
| 948 | 30.76 | humidity | 80 | 43200 | < th | dose independent | rect. | 12 | 8 |
| 968 | 30.77 | radiation | 1 | 43200 | > th | dose independent | sin | 8 | NA |
| 980 | 30.77 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 991 | 30.78 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 6 |