Os10g0193100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein.
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Os10g0193100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 226.56 | 0.707 | 2.92 | 0.0192 | 0.0537 | 0.606 | -0.0477 | 0.554 | -0.146 | 1.05 | 24.4 | 3537 | -- | -- |
| 226.74 | 0.701 | 2.93 | -0.0972 | 0.0266 | 0.644 | -0.0622 | -- | -0.163 | 23.6 | 24.4 | 3559 | -- | -- |
| 226.56 | 0.701 | 2.92 | 0.0219 | 0.0575 | 0.602 | -- | 0.553 | -0.147 | 1.27 | 24.37 | 3485 | -- | -- |
| 226.66 | 0.701 | 2.94 | -0.115 | 0.0561 | 0.652 | -- | -- | -0.181 | 1.39 | 24.36 | 3485 | -- | -- |
| 226.74 | 0.701 | 2.92 | 0.0199 | -- | 0.621 | -- | 0.552 | -0.143 | -- | 24.44 | 3569 | -- | -- |
| 238.98 | 0.725 | 2.93 | 0.0989 | 0.118 | -- | 0.0139 | -- | -0.125 | 0.318 | -- | -- | -- | -- |
| 238.98 | 0.724 | 2.93 | 0.0984 | 0.118 | -- | -- | -- | -0.125 | 0.309 | -- | -- | -- | -- |
| 226.81 | 0.701 | 2.94 | -0.117 | -- | 0.672 | -- | -- | -0.175 | -- | 24.43 | 3618 | -- | -- |
| 226.97 | 0.702 | 2.93 | -- | 0.0577 | 0.623 | -- | -- | -0.162 | 1.19 | 24.5 | 3473 | -- | -- |
| 239.87 | 0.724 | 2.92 | 0.102 | -- | -- | -- | -- | -0.123 | -- | -- | -- | -- | -- |
| 239.24 | 0.724 | 2.93 | -- | 0.12 | -- | -- | -- | -0.136 | 0.352 | -- | -- | -- | -- |
| 227.13 | 0.702 | 2.93 | -- | -- | 0.643 | -- | -- | -0.154 | -- | 24.7 | 3571 | -- | -- |
| 240.14 | 0.723 | 2.93 | -- | -- | -- | -- | -- | -0.134 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 218.44 | radiation | 30 | 10 | > th | dose independent | rect. | 15 | 18 |
| 3 | 220.42 | wind | 1 | 90 | < th | dose independent | rect. | 16 | 1 |
| 4 | 220.42 | wind | 1 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 5 | 220.97 | humidity | 70 | 10 | < th | dose independent | rect. | 7 | 1 |
| 65 | 220.97 | humidity | 70 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 131 | 223.49 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 7 | 1 |
| 139 | 223.49 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 153 | 223.55 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 157 | 223.64 | wind | 1 | 10 | < th | dose independent | rect. | 7 | 1 |
| 159 | 224.09 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 161 | 224.36 | wind | 1 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 165 | 224.62 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 182 | 225.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 5 |
| 185 | 225.43 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 7 |
| 187 | 225.45 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 7 |
| 188 | 225.46 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 192 | 225.49 | radiation | 30 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 194 | 225.52 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 201 | 225.58 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 202 | 225.60 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 14 | 1 |
| 224 | 225.69 | wind | 1 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 241 | 225.96 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 13 |
| 248 | 225.98 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 261 | 226.00 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 267 | 226.04 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 271 | 226.08 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 290 | 226.13 | temperature | 30 | 1440 | > th | dose independent | rect. | 8 | 9 |
| 327 | 226.18 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 4 |
| 339 | 226.21 | temperature | 30 | 1440 | < th | dose independent | sin | 3 | NA |
| 346 | 226.24 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 12 | 8 |
| 384 | 226.37 | wind | 3 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 389 | 226.41 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 20 |
| 436 | 226.52 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 4 |
| 470 | 226.57 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 471 | 226.58 | temperature | 30 | 1440 | > th | dose independent | sin | 2 | NA |
| 503 | 226.63 | radiation | 30 | 30 | > th | dose independent | rect. | 7 | 1 |
| 557 | 226.74 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 14 |
| 632 | 226.78 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 663 | 226.79 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 664 | 226.79 | temperature | 30 | 30 | > th | dose independent | rect. | 16 | 1 |
| 726 | 226.83 | temperature | 25 | 4320 | < th | dose independent | rect. | 18 | 14 |
| 759 | 226.89 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 761 | 226.91 | temperature | 30 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 763 | 226.91 | temperature | 30 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 765 | 226.91 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 773 | 226.94 | temperature | 30 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 803 | 227.02 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 817 | 227.03 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 844 | 227.09 | temperature | 25 | 1440 | > th | dose independent | rect. | 1 | 9 |
| 847 | 227.09 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 14 | 19 |
| 849 | 227.10 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 984 | 227.13 | humidity | 50 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 987 | 227.13 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 4 |