Os10g0190800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0190800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.19 | 0.336 | 7.57 | 1.05 | 0.646 | 0.121 | 0.24 | 2.97 | 0.357 | 4.5 | 19.68 | 241 | -- | -- |
| 55.07 | 0.346 | 7.64 | 0.503 | 0.718 | 0.447 | -0.605 | -- | 0.207 | 5.01 | 24.53 | 629 | -- | -- |
| 51.3 | 0.334 | 7.57 | 1.01 | 0.645 | 0.125 | -- | 2.75 | 0.346 | 4.51 | 19.6 | 245 | -- | -- |
| 55.67 | 0.348 | 7.63 | 0.473 | 0.719 | 0.441 | -- | -- | 0.194 | 5.12 | 24.3 | 610 | -- | -- |
| 65.92 | 0.378 | 7.54 | 1.28 | -- | -0.492 | -- | 3.64 | 0.487 | -- | 21.96 | 256 | -- | -- |
| 58.08 | 0.357 | 7.63 | 0.551 | 0.56 | -- | -0.693 | -- | 0.243 | 4.48 | -- | -- | -- | -- |
| 59.38 | 0.361 | 7.62 | 0.556 | 0.556 | -- | -- | -- | 0.247 | 4.49 | -- | -- | -- | -- |
| 71.65 | 0.394 | 7.64 | 0.456 | -- | 0.331 | -- | -- | 0.213 | -- | 23.9 | 2723 | -- | -- |
| 61.15 | 0.364 | 7.64 | -- | 0.715 | 0.554 | -- | -- | 0.157 | 5.42 | 23.89 | 683 | -- | -- |
| 75.91 | 0.407 | 7.63 | 0.578 | -- | -- | -- | -- | 0.261 | -- | -- | -- | -- | -- |
| 67.53 | 0.384 | 7.64 | -- | 0.567 | -- | -- | -- | 0.185 | 4.47 | -- | -- | -- | -- |
| 76.65 | 0.408 | 7.65 | -- | -- | 0.436 | -- | -- | 0.148 | -- | 23.7 | 2736 | -- | -- |
| 84.71 | 0.43 | 7.64 | -- | -- | -- | -- | -- | 0.197 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 11 |
| 6 | 50.64 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 6 |
| 7 | 50.65 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 31 | 50.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 40 | 50.71 | temperature | 30 | 1440 | < th | dose dependent | rect. | 22 | 6 |
| 41 | 50.72 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 4 |
| 54 | 50.74 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 105 | 50.80 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 124 | 50.84 | wind | 1 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 247 | 50.96 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 306 | 51.03 | temperature | 30 | 1440 | < th | dose dependent | sin | 11 | NA |
| 315 | 51.04 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 345 | 51.07 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 21 |
| 346 | 51.08 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 347 | 51.08 | temperature | 25 | 4320 | < th | dose independent | rect. | 12 | 18 |
| 364 | 51.08 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 385 | 51.10 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 420 | 51.14 | wind | 9 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 477 | 51.17 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 533 | 51.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 536 | 51.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 538 | 51.22 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 561 | 51.24 | wind | 9 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 590 | 51.26 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 620 | 51.28 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 629 | 51.29 | temperature | 25 | 4320 | < th | dose independent | rect. | 22 | 5 |
| 689 | 51.33 | temperature | 25 | 4320 | > th | dose independent | rect. | 22 | 4 |
| 690 | 51.33 | temperature | 25 | 4320 | > th | dose independent | rect. | 12 | 18 |
| 736 | 51.35 | temperature | 25 | 4320 | < th | dose independent | sin | 14 | NA |
| 913 | 51.43 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 943 | 51.45 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 19 |
| 984 | 51.47 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 2 |