Os10g0190500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF594 family protein.
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Os10g0190500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF594 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.92 | 0.467 | 11 | -1.2 | 2.99 | -1.33 | 2.2 | 0.444 | -0.736 | 7.21 | 58.75 | 900 | -- | -- |
| 99.01 | 0.463 | 11 | -1.16 | 3 | -1.33 | 2.35 | -- | -0.743 | 7.23 | 61.91 | 901 | -- | -- |
| 109.37 | 0.487 | 11 | -1.24 | 3 | -1.3 | -- | 1.58 | -0.755 | 7.18 | 58.92 | 889 | -- | -- |
| 113.3 | 0.496 | 11 | -1.09 | 2.96 | -1.22 | -- | -- | -0.753 | 7.16 | 62.85 | 913 | -- | -- |
| 476.55 | 1.02 | 11.1 | -1.05 | -- | -0.909 | -- | 0.597 | -0.782 | -- | 62.41 | 2798 | -- | -- |
| 124.52 | 0.523 | 11 | -1.11 | 2.6 | -- | 2.05 | -- | -0.673 | 6.74 | -- | -- | -- | -- |
| 135.1 | 0.544 | 11 | -1.08 | 2.61 | -- | -- | -- | -0.679 | 6.68 | -- | -- | -- | -- |
| 348.01 | 0.869 | 11 | -0.887 | -- | 1.89 | -- | -- | -0.238 | -- | 64.7 | 478 | -- | -- |
| 143.59 | 0.558 | 11 | -- | 2.97 | -1.19 | -- | -- | -0.706 | 7.19 | 72.72 | 895 | -- | -- |
| 490.57 | 1.03 | 11.1 | -1.02 | -- | -- | -- | -- | -0.627 | -- | -- | -- | -- | -- |
| 165.77 | 0.602 | 11 | -- | 2.6 | -- | -- | -- | -0.559 | 6.7 | -- | -- | -- | -- |
| 369.53 | 0.895 | 11 | -- | -- | 2.15 | -- | -- | -0.417 | -- | 62.07 | 495 | -- | -- |
| 517.9 | 1.06 | 11.1 | -- | -- | -- | -- | -- | -0.514 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.05 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 10 | 96.37 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 47 | 97.97 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 54 | 98.27 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 56 | 98.31 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 58 | 98.36 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 63 | 98.44 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 108 | 99.76 | humidity | 70 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 126 | 100.19 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 132 | 100.29 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 142 | 100.38 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 147 | 100.46 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 173 | 101.00 | humidity | 70 | 10 | > th | dose dependent | rect. | 22 | 22 |
| 187 | 101.16 | humidity | 70 | 720 | > th | dose dependent | rect. | 5 | 21 |
| 193 | 101.34 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 13 |
| 235 | 101.71 | humidity | 80 | 720 | > th | dose dependent | rect. | 9 | 15 |
| 254 | 101.85 | humidity | 50 | 1440 | > th | dose dependent | rect. | 3 | 12 |
| 258 | 101.88 | humidity | 50 | 1440 | > th | dose dependent | rect. | 1 | 14 |
| 302 | 102.08 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 316 | 102.13 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 328 | 102.20 | humidity | 60 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 330 | 102.21 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 415 | 102.50 | humidity | 90 | 1440 | < th | dose dependent | sin | 3 | NA |
| 424 | 102.54 | humidity | 60 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 484 | 102.70 | humidity | 70 | 90 | > th | dose dependent | rect. | 23 | 20 |
| 500 | 102.77 | humidity | 70 | 10 | > th | dose dependent | rect. | 7 | 12 |
| 503 | 102.78 | humidity | 80 | 720 | > th | dose dependent | sin | 19 | NA |
| 529 | 102.86 | humidity | 60 | 1440 | > th | dose dependent | sin | 2 | NA |
| 541 | 102.90 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 549 | 102.92 | humidity | 60 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 577 | 103.00 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 583 | 103.02 | humidity | 60 | 720 | > th | dose dependent | no | NA | NA |
| 586 | 103.02 | humidity | 60 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 589 | 103.03 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 645 | 103.15 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 647 | 103.15 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 661 | 103.17 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 21 |
| 702 | 103.28 | humidity | 60 | 720 | > th | dose dependent | rect. | 15 | 10 |
| 771 | 103.44 | humidity | 80 | 720 | > th | dose independent | rect. | 5 | 20 |
| 840 | 103.55 | humidity | 70 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 847 | 103.57 | humidity | 80 | 10 | > th | dose independent | rect. | 7 | 12 |
| 884 | 103.62 | humidity | 70 | 10 | > th | dose dependent | no | NA | NA |
| 896 | 103.64 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 898 | 103.64 | radiation | 10 | 1440 | < th | dose dependent | sin | 21 | NA |
| 948 | 103.73 | humidity | 70 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 953 | 103.74 | humidity | 70 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 986 | 103.79 | humidity | 70 | 10 | > th | dose dependent | rect. | 17 | 23 |