Os10g0189800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os10g0189800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.75 | 0.474 | 6.65 | -1.81 | 0.459 | -0.61 | -0.438 | -0.107 | -0.467 | 21.7 | 19.1 | 283 | -- | -- |
| 101.77 | 0.47 | 6.65 | -1.81 | 0.46 | -0.587 | -0.44 | -- | -0.47 | 21.7 | 19.1 | 284 | -- | -- |
| 102.46 | 0.471 | 6.65 | -1.79 | 0.461 | -0.6 | -- | -0.101 | -0.468 | 21.7 | 19.1 | 278 | -- | -- |
| 102.49 | 0.472 | 6.65 | -1.79 | 0.461 | -0.576 | -- | -- | -0.467 | 21.8 | 19.06 | 284 | -- | -- |
| 112.98 | 0.495 | 6.65 | -1.85 | -- | -0.541 | -- | 0.336 | -0.491 | -- | 19.5 | 552 | -- | -- |
| 108.18 | 0.488 | 6.64 | -1.62 | 0.461 | -- | -0.396 | -- | -0.391 | 21.1 | -- | -- | -- | -- |
| 108.72 | 0.488 | 6.64 | -1.61 | 0.461 | -- | -- | -- | -0.391 | 21.2 | -- | -- | -- | -- |
| 113.28 | 0.496 | 6.65 | -1.81 | -- | -0.6 | -- | -- | -0.493 | -- | 19.4 | 545 | -- | -- |
| 174.7 | 0.619 | 6.58 | -- | 0.446 | 0.16 | -- | -- | -0.147 | 20.5 | 23.9 | 154 | -- | -- |
| 121.09 | 0.514 | 6.62 | -1.6 | -- | -- | -- | -- | -0.393 | -- | -- | -- | -- | -- |
| 176.68 | 0.622 | 6.6 | -- | 0.462 | -- | -- | -- | -0.212 | 21 | -- | -- | -- | -- |
| 185.67 | 0.635 | 6.57 | -- | -- | 0.193 | -- | -- | -0.0912 | -- | 23.11 | 27 | -- | -- |
| 188.95 | 0.642 | 6.58 | -- | -- | -- | -- | -- | -0.215 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.87 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 6 |
| 4 | 92.90 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 6 | 93.13 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 5 |
| 8 | 93.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 13 |
| 12 | 93.55 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 1 |
| 20 | 93.90 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 1 | 5 |
| 38 | 94.94 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 60 | 95.56 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 91 | 96.01 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 13 |
| 95 | 96.09 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 104 | 96.18 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 112 | 96.32 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 125 | 96.50 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 5 |
| 129 | 96.51 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 14 |
| 138 | 96.55 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 15 | 15 |
| 167 | 96.80 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 10 |
| 174 | 96.87 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 180 | 96.88 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 8 | 18 |
| 188 | 96.94 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 2 | 1 |
| 189 | 96.94 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 201 | 97.06 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 12 | 18 |
| 203 | 97.07 | wind | 1.0 | 90 | > th | dose independent | rect. | 6 | 19 |
| 230 | 97.25 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 232 | 97.25 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 241 | 97.32 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 243 | 97.32 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 8 | 18 |
| 244 | 97.33 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 13 |
| 268 | 97.40 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 11 | 14 |
| 274 | 97.44 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 13 |
| 277 | 97.45 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 1 |
| 284 | 97.48 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 12 |
| 295 | 97.53 | temperature | 30.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 306 | 97.60 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 15 | 15 |
| 318 | 97.63 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 2 | 4 |
| 340 | 97.72 | temperature | 15.0 | 90 | > th | dose dependent | sin | 7 | NA |
| 346 | 97.76 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 5 |
| 348 | 97.76 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 5 |
| 354 | 97.80 | wind | 7.0 | 270 | < th | dose independent | rect. | 2 | 1 |
| 360 | 97.82 | wind | 9.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 361 | 97.82 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 364 | 97.82 | humidity | 50.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 368 | 97.82 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 370 | 97.82 | radiation | 20.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 374 | 97.82 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 19 |
| 377 | 97.83 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 6 |
| 382 | 97.84 | radiation | 40.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 389 | 97.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 1 |
| 390 | 97.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 1 |
| 397 | 97.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 1 |
| 399 | 97.88 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 1 |
| 400 | 97.88 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 1 |
| 404 | 97.88 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 1 |
| 406 | 97.88 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 1 |
| 411 | 97.88 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 11 | 19 |
| 412 | 97.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 23 |
| 413 | 97.88 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 1 |
| 425 | 97.91 | wind | 9.0 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 430 | 97.92 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 5 |
| 443 | 97.96 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 10 |
| 453 | 97.98 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 496 | 98.08 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 3 |
| 504 | 98.12 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 19 |
| 507 | 98.13 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 19 |
| 512 | 98.14 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 19 |
| 515 | 98.14 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 19 |
| 527 | 98.17 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 536 | 98.20 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 19 |
| 539 | 98.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 541 | 98.21 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 542 | 98.21 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 546 | 98.21 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 548 | 98.21 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 557 | 98.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 559 | 98.21 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 567 | 98.22 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 1 | 5 |
| 578 | 98.24 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 3 |
| 581 | 98.24 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 20 |
| 584 | 98.24 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 596 | 98.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 3 |
| 600 | 98.28 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 604 | 98.29 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 10 |
| 607 | 98.30 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 610 | 98.30 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 614 | 98.30 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 619 | 98.30 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 620 | 98.30 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 624 | 98.30 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 20 |
| 649 | 98.32 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 6 |
| 654 | 98.34 | radiation | 1.0 | 270 | < th | dose independent | rect. | 11 | 14 |
| 696 | 98.41 | humidity | 90.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 700 | 98.41 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 20 |
| 704 | 98.42 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 21 |
| 713 | 98.42 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 21 |
| 717 | 98.43 | wind | 9.0 | 90 | < th | dose dependent | rect. | 1 | 5 |
| 754 | 98.46 | radiation | 30.0 | 270 | < th | dose independent | rect. | 6 | 3 |
| 766 | 98.48 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 2 | 2 |
| 787 | 98.51 | radiation | 20.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 788 | 98.51 | radiation | 40.0 | 30 | < th | dose independent | rect. | 6 | 20 |
| 814 | 98.52 | radiation | 1.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 842 | 98.56 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 856 | 98.59 | radiation | 40.0 | 270 | < th | dose independent | rect. | 19 | 14 |
| 901 | 98.66 | temperature | 20.0 | 10 | < th | dose independent | rect. | 2 | 10 |
| 910 | 98.67 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 21 |
| 914 | 98.68 | radiation | 30.0 | 270 | < th | dose independent | rect. | 14 | 11 |