Os10g0188800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0188800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.27 | 0.454 | 2.47 | 3.32 | 0.0807 | -46.1 | -0.156 | 282 | 0.0613 | 6.7 | 994.9 | 669 | -- | -- |
| 100.29 | 0.47 | 3.03 | -0.0671 | 0.0923 | 0.0586 | -0.129 | -- | 0.0532 | 6.14 | 994.9 | 669 | -- | -- |
| 92.67 | 0.448 | 2.51 | 3.02 | 0.0912 | -46.3 | -- | 284 | 0.05 | 7.02 | 994.6 | 680 | -- | -- |
| 98.46 | 0.462 | 3.03 | -0.0873 | 0.0992 | 0.618 | -- | -- | 0.0546 | 6.33 | 994.6 | 704 | -- | -- |
| 92.96 | 0.449 | 2.5 | 3.12 | -- | -48.2 | -- | 295 | 0.0606 | -- | 994.6 | 704 | -- | -- |
| 100.29 | 0.469 | 3.03 | -0.0667 | 0.0917 | -- | -0.131 | -- | 0.0531 | 6.15 | -- | -- | -- | -- |
| 100.34 | 0.469 | 3.03 | -0.068 | 0.0911 | -- | -- | -- | 0.0536 | 6.22 | -- | -- | -- | -- |
| 99.02 | 0.463 | 3.03 | -0.0835 | -- | 0.591 | -- | -- | 0.0605 | -- | 994.5 | 704 | -- | -- |
| 98.64 | 0.463 | 3.03 | -- | 0.109 | 0.618 | -- | -- | 0.0592 | 6.82 | 994.6 | 704 | -- | -- |
| 100.77 | 0.469 | 3.03 | -0.0655 | -- | -- | -- | -- | 0.0556 | -- | -- | -- | -- | -- |
| 100.46 | 0.469 | 3.03 | -- | 0.0901 | -- | -- | -- | 0.0612 | 6.26 | -- | -- | -- | -- |
| 99.2 | 0.464 | 3.03 | -- | -- | 0.582 | -- | -- | 0.0708 | -- | 994.5 | 704 | -- | -- |
| 100.88 | 0.469 | 3.03 | -- | -- | -- | -- | -- | 0.0628 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.10 | temperature | 30.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 2 | 92.27 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 3 | 92.32 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 1 |
| 7 | 92.33 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 11 | 92.45 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 18 | 92.45 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 30 | 92.52 | atmosphere | 995.0 | 720 | < th | dose independent | rect. | 14 | 1 |
| 71 | 92.52 | atmosphere | 995.0 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 123 | 92.96 | atmosphere | 995.0 | 720 | > th | dose independent | sin | 7 | NA |
| 125 | 93.04 | atmosphere | 995.0 | 720 | < th | dose independent | sin | 6 | NA |
| 133 | 93.36 | atmosphere | 995.0 | 720 | < th | dose dependent | sin | 7 | NA |
| 140 | 93.74 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 141 | 93.75 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 143 | 93.79 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 144 | 93.79 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 147 | 93.79 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 151 | 93.79 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 161 | 93.79 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 162 | 93.79 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 182 | 93.79 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 186 | 93.79 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 192 | 93.81 | temperature | 20.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 194 | 93.81 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 195 | 93.81 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 196 | 93.82 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 197 | 93.83 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 198 | 93.84 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 199 | 93.85 | wind | 5.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 202 | 93.85 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 204 | 93.85 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 205 | 93.85 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 208 | 93.85 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 209 | 93.85 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 211 | 93.85 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 216 | 93.85 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 217 | 93.85 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 222 | 93.87 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 223 | 93.87 | wind | 9.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 224 | 93.87 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 227 | 93.88 | wind | 1.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 230 | 93.89 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 231 | 93.89 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 264 | 94.01 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 272 | 94.14 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 275 | 94.16 | radiation | 1.0 | 10 | < th | dose independent | rect. | 7 | 5 |
| 277 | 94.16 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 279 | 94.17 | radiation | 1.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 282 | 94.17 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 289 | 94.29 | atmosphere | 995.0 | 720 | > th | dose independent | sin | 1 | NA |
| 341 | 94.57 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 342 | 94.57 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 24 | 6 |
| 381 | 94.76 | radiation | 1.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 426 | 94.89 | atmosphere | 995.0 | 720 | > th | dose independent | no | NA | NA |
| 453 | 94.94 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 469 | 95.01 | humidity | 80.0 | 90 | < th | dose independent | rect. | 1 | 2 |
| 475 | 95.01 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 1 | 2 |
| 485 | 95.06 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 2 | 2 |
| 494 | 95.17 | atmosphere | 995.0 | 720 | < th | dose independent | no | NA | NA |
| 693 | 95.21 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 2 |
| 739 | 95.39 | atmosphere | 995.0 | 720 | < th | dose dependent | no | NA | NA |
| 930 | 95.41 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 957 | 95.41 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |