Os10g0183500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0183500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.71 | 0.372 | 8.76 | 1.03 | 1.01 | -0.727 | 0.187 | -0.264 | -0.01 | 19.4 | 20.87 | 400 | -- | -- |
| 62.93 | 0.369 | 8.76 | 1.08 | 1 | -0.708 | 0.0856 | -- | 0.0024 | 19.4 | 20.85 | 395 | -- | -- |
| 62.8 | 0.369 | 8.76 | 1.04 | 1.01 | -0.722 | -- | -0.206 | -0.00727 | 19.4 | 20.83 | 396 | -- | -- |
| 62.95 | 0.37 | 8.76 | 1.08 | 1 | -0.708 | -- | -- | 0.00263 | 19.4 | 20.84 | 395 | -- | -- |
| 110.83 | 0.49 | 8.74 | 0.998 | -- | -0.705 | -- | -0.42 | -0.0119 | -- | 21.43 | 1528 | -- | -- |
| 80.8 | 0.421 | 8.79 | 0.838 | 0.9 | -- | 0.0512 | -- | -0.167 | 19.6 | -- | -- | -- | -- |
| 80.8 | 0.421 | 8.79 | 0.837 | 0.9 | -- | -- | -- | -0.167 | 19.6 | -- | -- | -- | -- |
| 111.18 | 0.491 | 8.73 | 1.1 | -- | -0.674 | -- | -- | 0.011 | -- | 21.6 | 1522 | -- | -- |
| 91.08 | 0.444 | 8.79 | -- | 0.963 | -0.423 | -- | -- | -0.154 | 19.6 | 21.4 | 408 | -- | -- |
| 124.38 | 0.521 | 8.77 | 0.825 | -- | -- | -- | -- | -0.18 | -- | -- | -- | -- | -- |
| 99.27 | 0.466 | 8.81 | -- | 0.894 | -- | -- | -- | -0.26 | 19.7 | -- | -- | -- | -- |
| 132.01 | 0.537 | 8.77 | -- | -- | -0.394 | -- | -- | -0.175 | -- | 22 | 7 | -- | -- |
| 142.32 | 0.557 | 8.79 | -- | -- | -- | -- | -- | -0.272 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.05 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 4 | 56.58 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 7 | 57.34 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 8 | 57.49 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 35 | 58.77 | temperature | 30.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 37 | 58.86 | temperature | 15.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 43 | 59.07 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 51 | 59.26 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 82 | 60.01 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 104 | 60.52 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 120 | 60.85 | wind | 9.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 124 | 60.90 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 22 |
| 156 | 61.35 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 172 | 61.52 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 21 | 17 |
| 223 | 62.15 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 269 | 62.58 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 274 | 62.64 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 286 | 62.76 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 295 | 62.83 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 300 | 62.90 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 315 | 63.07 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 346 | 63.28 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 349 | 63.30 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 361 | 63.38 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 369 | 63.42 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 5 |
| 385 | 63.50 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 406 | 63.62 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 409 | 63.64 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 470 | 63.97 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 10 |
| 490 | 64.06 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 512 | 64.21 | temperature | 20.0 | 270 | > th | dose independent | sin | 7 | NA |
| 525 | 64.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 528 | 64.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 546 | 64.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 555 | 64.40 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 568 | 64.45 | temperature | 25.0 | 270 | < th | dose independent | sin | 8 | NA |
| 572 | 64.48 | wind | 9.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 577 | 64.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 623 | 64.65 | temperature | 20.0 | 270 | < th | dose independent | rect. | 23 | 22 |
| 634 | 64.68 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 649 | 64.75 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 675 | 64.82 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 685 | 64.84 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 693 | 64.86 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 730 | 64.96 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 733 | 64.97 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 743 | 64.99 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 745 | 65.00 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 758 | 65.03 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 761 | 65.03 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 788 | 65.10 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 842 | 65.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 872 | 65.30 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 881 | 65.32 | temperature | 20.0 | 270 | < th | dose independent | rect. | 21 | 15 |
| 900 | 65.35 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 20 | 7 |
| 964 | 65.45 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 978 | 65.47 | temperature | 20.0 | 270 | > th | dose independent | no | NA | NA |