Os10g0183000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disease resistance protein family protein.
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Os10g0183000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Disease resistance protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.16 | 0.58 | 6.16 | -0.351 | 1.64 | 1.83 | -0.364 | 1.07 | 0.0463 | 23.3 | 5.047 | 394 | -- | -- |
| 152.94 | 0.576 | 6.18 | -0.483 | 1.68 | 1.82 | -0.323 | -- | 0.0111 | 23.3 | 14.8 | 365 | -- | -- |
| 152.64 | 0.575 | 6.16 | -0.339 | 1.66 | 1.86 | -- | 1.08 | 0.0435 | 23.4 | 1.192 | 370 | -- | -- |
| 153.39 | 0.577 | 6.18 | -0.492 | 1.68 | 1.84 | -- | -- | 0.00378 | 23.3 | 14.94 | 363 | -- | -- |
| 263.99 | 0.757 | 6.15 | -0.571 | -- | 2.7 | -- | 1.16 | -0.0899 | -- | 8.452 | 781 | -- | -- |
| 191.24 | 0.648 | 6.13 | -0.12 | 1.77 | -- | -0.447 | -- | 0.272 | 22.2 | -- | -- | -- | -- |
| 192.03 | 0.649 | 6.13 | -0.103 | 1.77 | -- | -- | -- | 0.272 | 22.2 | -- | -- | -- | -- |
| 264.49 | 0.757 | 6.18 | -0.766 | -- | 2.55 | -- | -- | -0.142 | -- | 16.12 | 778 | -- | -- |
| 159.57 | 0.588 | 6.15 | -- | 1.67 | 1.56 | -- | -- | 0.0956 | 23.2 | 15.38 | 365 | -- | -- |
| 382.83 | 0.914 | 6.08 | -0.0774 | -- | -- | -- | -- | 0.276 | -- | -- | -- | -- | -- |
| 192.31 | 0.649 | 6.12 | -- | 1.77 | -- | -- | -- | 0.284 | 22.2 | -- | -- | -- | -- |
| 278.44 | 0.777 | 6.15 | -- | -- | 2.22 | -- | -- | -0.0218 | -- | 16.7 | 760 | -- | -- |
| 382.99 | 0.913 | 6.08 | -- | -- | -- | -- | -- | 0.284 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 145.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 19 |
| 13 | 148.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 18 | 149.16 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 18 |
| 26 | 150.08 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 35 | 150.51 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 46 | 150.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 49 | 150.80 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 62 | 150.94 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 18 |
| 67 | 151.09 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 71 | 151.12 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 91 | 151.54 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 17 |
| 102 | 151.67 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 107 | 151.74 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 114 | 151.79 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 22 |
| 185 | 152.41 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 18 |
| 189 | 152.42 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 244 | 152.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 266 | 152.88 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 361 | 153.25 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 429 | 153.51 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 7 |
| 441 | 153.53 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 459 | 153.59 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 12 |
| 466 | 153.62 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 488 | 153.67 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 5 |
| 599 | 153.93 | temperature | 10 | 1440 | > th | dose dependent | sin | 14 | NA |
| 657 | 154.06 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 665 | 154.10 | temperature | 20 | 1440 | > th | dose dependent | sin | 8 | NA |
| 671 | 154.11 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 689 | 154.15 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 708 | 154.18 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 22 |
| 759 | 154.27 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 766 | 154.27 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 768 | 154.28 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 22 |
| 770 | 154.29 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 806 | 154.34 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 832 | 154.37 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 833 | 154.38 | temperature | 10 | 1440 | > th | dose dependent | sin | 7 | NA |
| 858 | 154.41 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 936 | 154.49 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 987 | 154.57 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 17 |