Os10g0180800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EGF domain containing protein.
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Os10g0180800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : EGF domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 567.16 | 1.12 | 9.03 | 1.8 | 2.52 | -0.317 | 0.553 | 9.56 | 1.27 | 0.0368 | 0.01496 | 6227 | 19 | -- |
| 650.7 | 1.19 | 9.18 | 1.91 | 2.55 | -0.899 | 0.507 | -- | 0.943 | 0.0845 | -1.563 | 47520 | 1.57 | -- |
| 568.43 | 1.11 | 9.02 | 1.79 | 2.52 | -0.318 | -- | 9.49 | 1.28 | 0.0613 | 0.03393 | 6226 | 19 | -- |
| 651.8 | 1.19 | 9.19 | 1.88 | 2.55 | -0.904 | -- | -- | 0.937 | 0.106 | -1.568 | 47520 | 1.55 | -- |
| 965.51 | 1.45 | 8.93 | 1.91 | -- | -0.552 | -- | 10.1 | 1.31 | -- | 0.114 | 6200 | 18.6 | -- |
| 683.54 | 1.23 | 9.08 | 2.41 | 2.59 | -- | 0.6 | -- | 1.4 | 0.0871 | -- | -- | -- | -- |
| 685.09 | 1.23 | 9.08 | 2.39 | 2.59 | -- | -- | -- | 1.4 | 0.112 | -- | -- | -- | -- |
| 691.06 | 1.22 | 9.16 | 2.01 | -- | -2.96 | -- | -- | 1.16 | -- | -1.136 | 9439 | 0.53 | -- |
| 703.62 | 1.24 | 9.3 | -- | 2.53 | -1.54 | -- | -- | 0.432 | 0.123 | -0.9293 | 47520 | 23.2 | -- |
| 1107.37 | 1.55 | 9.03 | 2.47 | -- | -- | -- | -- | 1.43 | -- | -- | -- | -- | -- |
| 835.4 | 1.35 | 9.14 | -- | 2.62 | -- | -- | -- | 1.13 | 0.163 | -- | -- | -- | -- |
| 764.65 | 1.29 | 9.02 | -- | -- | -3.6 | -- | -- | 0.954 | -- | -0.9798 | 32526 | 0.893 | -- |
| 1268.39 | 1.66 | 9.09 | -- | -- | -- | -- | -- | 1.16 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 544.32 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 2 | 545.89 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 3 |
| 5 | 554.56 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 7 | 557.53 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 9 | 559.19 | wind | 1 | 14400 | < th | dose dependent | rect. | 24 | 4 |
| 11 | 561.05 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 12 |
| 12 | 561.17 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 8 |
| 13 | 561.19 | wind | 5 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 14 | 561.20 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 6 |
| 15 | 561.20 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 10 |
| 16 | 561.41 | wind | 1 | 14400 | > th | dose independent | rect. | 22 | 12 |
| 17 | 561.66 | wind | 9 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 21 | 561.93 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 14 |
| 23 | 561.97 | wind | 1 | 14400 | > th | dose dependent | rect. | 17 | 15 |
| 31 | 562.37 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 43 | 562.69 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 15 |
| 51 | 563.03 | wind | 1 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 58 | 563.25 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 70 | 563.56 | wind | 1 | 14400 | < th | dose dependent | rect. | 24 | 14 |
| 71 | 563.57 | wind | 1 | 43200 | < th | dose independent | rect. | 5 | 8 |
| 79 | 563.82 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 102 | 564.17 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 103 | 564.18 | wind | 9 | 14400 | < th | dose dependent | rect. | 20 | 14 |
| 115 | 564.49 | wind | 7 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 122 | 564.59 | wind | 9 | 14400 | < th | dose dependent | sin | 11 | NA |
| 129 | 564.68 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 161 | 565.10 | wind | 1 | 14400 | < th | dose independent | sin | 5 | NA |
| 170 | 565.18 | wind | 1 | 14400 | > th | dose independent | sin | 5 | NA |
| 188 | 565.38 | wind | 1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 194 | 565.43 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 207 | 565.58 | wind | 1 | 14400 | > th | dose dependent | sin | 11 | NA |
| 208 | 565.59 | wind | 5 | 14400 | < th | dose dependent | sin | 7 | NA |
| 218 | 565.75 | wind | 1 | 14400 | < th | dose dependent | sin | 6 | NA |
| 219 | 565.76 | wind | 1 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 257 | 566.34 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 267 | 566.45 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 283 | 566.58 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 8 |
| 338 | 567.07 | wind | 3 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 354 | 567.20 | wind | 3 | 14400 | > th | dose independent | rect. | 3 | 7 |
| 357 | 567.22 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 381 | 567.43 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 525 | 568.95 | wind | 3 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 575 | 569.41 | wind | 1 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 585 | 569.52 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 594 | 569.63 | humidity | 80 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 655 | 570.14 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 656 | 570.14 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 676 | 570.29 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 11 | 4 |
| 729 | 570.65 | wind | 1 | 14400 | < th | dose dependent | rect. | 16 | 21 |
| 735 | 570.69 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 882 | 571.68 | wind | 7 | 14400 | > th | dose dependent | rect. | 15 | 6 |
| 898 | 571.80 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 6 |
| 956 | 572.19 | humidity | 50 | 14400 | > th | dose dependent | rect. | 3 | 1 |