Os10g0180000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NpGUT1 homolog.
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Os10g0180000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : NpGUT1 homolog.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.31 | 0.421 | 9.61 | 0.684 | 1.05 | -1.46 | 0.77 | -1.65 | 0.486 | 8.92 | 16.6 | 112 | -- | -- |
| 82.25 | 0.422 | 9.58 | 0.933 | 1.09 | -1.36 | 0.719 | -- | 0.555 | 8.87 | 18.53 | 101 | -- | -- |
| 82.16 | 0.422 | 9.6 | 0.755 | 1.04 | -1.39 | -- | -1.25 | 0.501 | 8.91 | 17.8 | 123 | -- | -- |
| 83.57 | 0.426 | 9.57 | 0.965 | 1.05 | -1.42 | -- | -- | 0.562 | 8.92 | 18.1 | 113 | -- | -- |
| 113.88 | 0.497 | 9.61 | 0.918 | -- | -1.77 | -- | -1.03 | 0.606 | -- | 18.6 | 511 | -- | -- |
| 109.09 | 0.49 | 9.62 | 0.614 | 1.21 | -- | 1.01 | -- | 0.329 | 7.3 | -- | -- | -- | -- |
| 111.87 | 0.495 | 9.62 | 0.637 | 1.21 | -- | -- | -- | 0.327 | 7.33 | -- | -- | -- | -- |
| 114.92 | 0.499 | 9.58 | 1.1 | -- | -1.8 | -- | -- | 0.654 | -- | 18.93 | 517 | -- | -- |
| 105.44 | 0.478 | 9.61 | -- | 1.07 | -1.03 | -- | -- | 0.398 | 8.44 | 19.3 | 113 | -- | -- |
| 189.73 | 0.644 | 9.65 | 0.657 | -- | -- | -- | -- | 0.347 | -- | -- | -- | -- | -- |
| 122.55 | 0.518 | 9.64 | -- | 1.22 | -- | -- | -- | 0.256 | 7.29 | -- | -- | -- | -- |
| 138.67 | 0.548 | 9.65 | -- | -- | -1.44 | -- | -- | 0.38 | -- | 24.4 | 485 | -- | -- |
| 201.12 | 0.662 | 9.67 | -- | -- | -- | -- | -- | 0.274 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.60 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 11 | 78.33 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 23 | 79.45 | temperature | 15 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 34 | 79.82 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 41 | 80.05 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 64 | 80.56 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 81 | 81.08 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 86 | 81.22 | temperature | 15 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 91 | 81.32 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 93 | 81.34 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 94 | 81.35 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 95 | 81.35 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 96 | 81.36 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 99 | 81.38 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 103 | 81.49 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 129 | 81.93 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 138 | 82.01 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 161 | 82.23 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 169 | 82.27 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 173 | 82.33 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 183 | 82.49 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 208 | 82.86 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 246 | 83.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 258 | 83.29 | temperature | 20 | 4320 | > th | dose independent | rect. | 14 | 11 |
| 268 | 83.36 | temperature | 20 | 4320 | < th | dose independent | rect. | 14 | 11 |
| 271 | 83.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 277 | 83.42 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 331 | 83.84 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 337 | 83.86 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 341 | 83.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 346 | 83.91 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 376 | 84.10 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 411 | 84.28 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 428 | 84.36 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 3 |
| 443 | 84.40 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 464 | 84.48 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 467 | 84.49 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 534 | 84.65 | temperature | 20 | 4320 | < th | dose independent | sin | 17 | NA |
| 544 | 84.68 | temperature | 20 | 4320 | > th | dose independent | sin | 17 | NA |
| 545 | 84.68 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 10 |
| 564 | 84.74 | temperature | 20 | 720 | > th | dose dependent | sin | 4 | NA |
| 590 | 84.81 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 696 | 85.03 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 779 | 85.19 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 787 | 85.20 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 5 |
| 810 | 85.24 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 839 | 85.29 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 898 | 85.40 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 945 | 85.48 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 957 | 85.51 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 3 |
| 987 | 85.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 18 |