Os10g0176300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0176300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.73 | 0.479 | 3.62 | 0.347 | 0.185 | 1.64 | 0.184 | 2.53 | 0.00635 | 8.73 | 18.9 | 6926 | -- | -- |
| 108.24 | 0.485 | 3.52 | 0.426 | 0.173 | 0.899 | 0.22 | -- | 0.0583 | 9.6 | 18.93 | 6989 | -- | -- |
| 103.83 | 0.475 | 3.62 | 0.356 | 0.184 | 1.65 | -- | 2.54 | 0.0074 | 8.95 | 18.97 | 6957 | -- | -- |
| 108.04 | 0.484 | 3.53 | 0.45 | 0.192 | 0.833 | -- | -- | 0.0347 | 9.19 | 19.14 | 7320 | -- | -- |
| 105.74 | 0.479 | 3.62 | 0.354 | -- | 1.64 | -- | 2.52 | 0.00908 | -- | 18.96 | 6829 | -- | -- |
| 116.88 | 0.507 | 3.57 | -0.115 | 0.197 | -- | 0.173 | -- | -0.175 | 9.18 | -- | -- | -- | -- |
| 116.98 | 0.506 | 3.57 | -0.108 | 0.196 | -- | -- | -- | -0.175 | 9.4 | -- | -- | -- | -- |
| 110.16 | 0.489 | 3.53 | 0.458 | -- | 0.842 | -- | -- | 0.0379 | -- | 19.11 | 7476 | -- | -- |
| 110.76 | 0.49 | 3.54 | -- | 0.193 | 0.54 | -- | -- | -0.0682 | 9.27 | 19 | 6822 | -- | -- |
| 119.23 | 0.51 | 3.58 | -0.11 | -- | -- | -- | -- | -0.174 | -- | -- | -- | -- | -- |
| 117.29 | 0.507 | 3.57 | -- | 0.196 | -- | -- | -- | -0.162 | 9.45 | -- | -- | -- | -- |
| 108.29 | 0.485 | 3.54 | -- | -- | 0.522 | -- | -- | -0.00328 | -- | 22.21 | 1914 | -- | -- |
| 119.55 | 0.51 | 3.58 | -- | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 103.99 | temperature | 25 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 5 | 104.47 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 22 |
| 6 | 104.48 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 26 | 105.08 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 9 |
| 43 | 105.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 44 | 105.31 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 47 | 105.32 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 55 | 105.40 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 69 | 105.49 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 71 | 105.50 | temperature | 20 | 4320 | < th | dose dependent | rect. | 2 | 2 |
| 86 | 105.56 | temperature | 25 | 1440 | < th | dose dependent | sin | 17 | NA |
| 91 | 105.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 16 |
| 118 | 105.63 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 22 |
| 120 | 105.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 166 | 105.76 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 180 | 105.79 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 193 | 105.83 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 219 | 105.88 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 274 | 105.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 22 |
| 286 | 106.01 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 20 |
| 300 | 106.04 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 13 |
| 341 | 106.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 381 | 106.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 388 | 106.21 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 17 |
| 401 | 106.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 438 | 106.28 | temperature | 20 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 448 | 106.29 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 490 | 106.34 | temperature | 25 | 270 | < th | dose dependent | sin | 4 | NA |
| 512 | 106.36 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 513 | 106.36 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 651 | 106.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 5 |
| 655 | 106.50 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 656 | 106.51 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 681 | 106.54 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 723 | 106.58 | wind | 9 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 825 | 106.67 | wind | 9 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 873 | 106.71 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 943 | 106.77 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 953 | 106.78 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 972 | 106.80 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 990 | 106.81 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 8 |