Os10g0173000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0173000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 412.72 | 0.955 | 8.43 | -1.58 | 3.95 | 3.42 | -1.06 | -2.17 | -0.674 | 11.6 | 25.04 | 602 | 8.17 | -- |
| 414.21 | 0.948 | 8.43 | -1.34 | 3.94 | 3.3 | -0.98 | -- | -0.644 | 11.6 | 25 | 600 | 8.32 | -- |
| 416.85 | 0.951 | 8.42 | -1.43 | 3.95 | 3.31 | -- | -0.576 | -0.644 | 11.6 | 25 | 602 | 8.12 | -- |
| 416.97 | 0.951 | 8.42 | -1.37 | 3.95 | 3.29 | -- | -- | -0.635 | 11.6 | 25 | 602 | 8.18 | -- |
| 1057.92 | 1.52 | 8.48 | -1.49 | -- | 3.63 | -- | -5.9 | -0.479 | -- | 28.03 | 1680 | 11.7 | -- |
| 574.48 | 1.12 | 8.39 | -0.801 | 3.04 | -- | -1.5 | -- | -0.459 | 12.1 | -- | -- | -- | -- |
| 584.27 | 1.13 | 8.4 | -0.861 | 3.05 | -- | -- | -- | -0.466 | 12.1 | -- | -- | -- | -- |
| 1028.46 | 1.5 | 8.46 | -1.25 | -- | 3.05 | -- | -- | -0.506 | -- | 26.9 | 1653 | 13.5 | -- |
| 464.12 | 1 | 8.41 | -- | 3.88 | 2.98 | -- | -- | -0.503 | 11.7 | 25 | 596 | 7.93 | -- |
| 1169.48 | 1.6 | 8.46 | -0.957 | -- | -- | -- | -- | -0.51 | -- | -- | -- | -- | -- |
| 603.81 | 1.15 | 8.37 | -- | 3.06 | -- | -- | -- | -0.37 | 12.1 | -- | -- | -- | -- |
| 1068.83 | 1.53 | 8.43 | -- | -- | 2.85 | -- | -- | -0.371 | -- | 26.9 | 1653 | 13.5 | -- |
| 1193.65 | 1.61 | 8.44 | -- | -- | -- | -- | -- | -0.404 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 408.47 | radiation | 1 | 720 | < th | dose independent | rect. | 7 | 12 |
| 2 | 408.87 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 12 |
| 5 | 409.19 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 18 |
| 24 | 413.40 | radiation | 10 | 720 | < th | dose dependent | rect. | 15 | 4 |
| 26 | 414.41 | radiation | 1 | 720 | < th | dose dependent | rect. | 7 | 12 |
| 27 | 414.78 | radiation | 1 | 720 | < th | dose independent | rect. | 17 | 2 |
| 29 | 416.14 | radiation | 1 | 720 | < th | dose independent | rect. | 9 | 10 |
| 32 | 416.42 | radiation | 1 | 720 | < th | dose independent | rect. | 13 | 6 |
| 36 | 416.57 | temperature | 25 | 720 | > th | dose dependent | sin | 16 | NA |
| 46 | 417.37 | radiation | 20 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 79 | 423.74 | radiation | 1 | 720 | < th | dose dependent | rect. | 9 | 10 |
| 111 | 428.44 | radiation | 1 | 720 | > th | dose dependent | rect. | 15 | 16 |
| 114 | 428.86 | humidity | 60 | 720 | > th | dose dependent | rect. | 15 | 5 |
| 118 | 429.67 | temperature | 30 | 720 | < th | dose independent | rect. | 14 | 14 |
| 132 | 431.07 | humidity | 60 | 720 | > th | dose dependent | rect. | 14 | 7 |
| 142 | 432.11 | humidity | 70 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 160 | 433.25 | radiation | 10 | 720 | > th | dose independent | sin | 15 | NA |
| 161 | 433.30 | temperature | 30 | 720 | < th | dose independent | rect. | 14 | 6 |
| 170 | 434.00 | humidity | 90 | 720 | < th | dose dependent | rect. | 13 | 19 |
| 172 | 434.05 | humidity | 80 | 720 | > th | dose independent | rect. | 11 | 10 |
| 174 | 434.19 | humidity | 60 | 720 | > th | dose dependent | sin | 20 | NA |
| 190 | 435.37 | humidity | 80 | 720 | > th | dose independent | rect. | 15 | 5 |
| 192 | 435.46 | humidity | 80 | 720 | > th | dose independent | rect. | 13 | 8 |
| 204 | 435.86 | humidity | 90 | 720 | < th | dose dependent | rect. | 13 | 12 |
| 206 | 435.88 | humidity | 90 | 720 | < th | dose dependent | sin | 15 | NA |
| 210 | 436.15 | radiation | 1 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 234 | 436.58 | radiation | 10 | 720 | < th | dose dependent | sin | 15 | NA |
| 238 | 436.87 | humidity | 80 | 720 | < th | dose independent | rect. | 13 | 8 |
| 275 | 438.18 | radiation | 10 | 720 | < th | dose dependent | rect. | 15 | 11 |
| 308 | 438.97 | humidity | 80 | 720 | > th | dose independent | sin | 20 | NA |
| 311 | 439.05 | radiation | 1 | 720 | > th | dose independent | rect. | 17 | 13 |
| 336 | 439.69 | temperature | 30 | 720 | > th | dose independent | rect. | 13 | 6 |
| 359 | 440.04 | radiation | 10 | 720 | < th | dose dependent | rect. | 14 | 13 |
| 362 | 440.12 | radiation | 10 | 720 | > th | dose independent | rect. | 13 | 18 |
| 376 | 440.37 | radiation | 10 | 720 | > th | dose independent | rect. | 15 | 16 |
| 412 | 440.85 | radiation | 1 | 720 | < th | dose independent | rect. | 17 | 10 |
| 421 | 441.05 | temperature | 30 | 720 | < th | dose independent | sin | 17 | NA |
| 433 | 441.40 | radiation | 20 | 720 | > th | dose dependent | rect. | 15 | 16 |
| 439 | 441.49 | radiation | 20 | 720 | > th | dose dependent | rect. | 15 | 2 |
| 470 | 442.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 10 |
| 480 | 442.17 | humidity | 80 | 720 | > th | dose independent | rect. | 7 | 15 |
| 501 | 442.68 | radiation | 10 | 720 | > th | dose independent | rect. | 13 | 5 |
| 525 | 442.89 | radiation | 10 | 720 | > th | dose independent | rect. | 15 | 3 |
| 560 | 443.27 | radiation | 30 | 720 | > th | dose independent | rect. | 15 | 1 |
| 590 | 443.83 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 12 |
| 594 | 443.91 | radiation | 20 | 1440 | > th | dose independent | rect. | 15 | 20 |
| 633 | 444.68 | temperature | 30 | 720 | > th | dose independent | sin | 16 | NA |
| 652 | 445.06 | radiation | 30 | 720 | > th | dose independent | rect. | 15 | 17 |
| 665 | 445.27 | temperature | 30 | 720 | < th | dose independent | rect. | 1 | 19 |
| 702 | 445.73 | radiation | 1 | 720 | > th | dose dependent | sin | 14 | NA |
| 711 | 445.84 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 748 | 446.35 | radiation | 20 | 720 | < th | dose dependent | rect. | 14 | 17 |
| 749 | 446.37 | radiation | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 792 | 446.83 | temperature | 30 | 720 | < th | dose independent | rect. | 14 | 21 |
| 829 | 447.21 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 849 | 447.45 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 1 |