Os10g0170200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 40S ribosomal protein S20 (S22) (Fragment).
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Os10g0170200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 40S ribosomal protein S20 (S22) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.82 | 0.435 | 14.7 | 1.34 | 0.935 | 0.45 | 1.08 | -0.951 | 0.357 | 19.8 | 20.01 | 4211 | -- | -- |
| 86.4 | 0.433 | 14.7 | 1.53 | 0.925 | 0.661 | 1.01 | -- | 0.419 | 19.6 | 19.8 | 2881 | -- | -- |
| 89.06 | 0.44 | 14.7 | 1.34 | 0.939 | 0.454 | -- | -0.961 | 0.357 | 19.7 | 20.25 | 4299 | -- | -- |
| 89.62 | 0.441 | 14.7 | 1.49 | 0.935 | 0.673 | -- | -- | 0.407 | 19.6 | 19.9 | 2865 | -- | -- |
| 135.69 | 0.543 | 14.7 | 1.35 | -- | 0.529 | -- | -0.674 | 0.353 | -- | 20.3 | 3672 | -- | -- |
| 94.06 | 0.455 | 14.6 | 1.88 | 0.927 | -- | 1.15 | -- | 0.563 | 19.8 | -- | -- | -- | -- |
| 97.89 | 0.463 | 14.6 | 1.85 | 0.929 | -- | -- | -- | 0.565 | 19.7 | -- | -- | -- | -- |
| 135.5 | 0.542 | 14.6 | 1.5 | -- | 0.719 | -- | -- | 0.392 | -- | 19.42 | 2116 | -- | -- |
| 98.15 | 0.461 | 14.8 | -- | 0.926 | 1.54 | -- | -- | 0.0115 | 19.6 | 18.1 | 47520 | -- | -- |
| 144.46 | 0.562 | 14.6 | 1.83 | -- | -- | -- | -- | 0.552 | -- | -- | -- | -- | -- |
| 187.7 | 0.641 | 14.7 | -- | 0.915 | -- | -- | -- | 0.36 | 19.9 | -- | -- | -- | -- |
| 144.18 | 0.559 | 14.7 | -- | -- | 1.52 | -- | -- | -0.00224 | -- | 18.12 | 47520 | -- | -- |
| 233.2 | 0.713 | 14.7 | -- | -- | -- | -- | -- | 0.348 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.63 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 9 | 19 |
| 5 | 78.76 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 9 | 6 |
| 22 | 79.59 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 32 | 79.80 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 59 | 80.39 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 90 | 80.84 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 111 | 81.25 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 119 | 81.39 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 14 |
| 121 | 81.43 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 19 | 17 |
| 138 | 81.61 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 168 | 81.88 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 188 | 81.99 | wind | 3.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 215 | 82.14 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 20 |
| 221 | 82.18 | wind | 3.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 243 | 82.30 | wind | 5.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 250 | 82.36 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 254 | 82.38 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 255 | 82.39 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 293 | 82.62 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 309 | 82.74 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 6 |
| 319 | 82.77 | radiation | 1.0 | 30 | > th | dose independent | rect. | 18 | 15 |
| 323 | 82.79 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 324 | 82.80 | temperature | 20.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 331 | 82.82 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 6 |
| 336 | 82.85 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 353 | 82.95 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 356 | 82.96 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 360 | 82.97 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 19 |
| 361 | 82.97 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 362 | 82.98 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 368 | 83.01 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 4 |
| 383 | 83.02 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 5 |
| 384 | 83.02 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 5 |
| 393 | 83.06 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 395 | 83.06 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 397 | 83.06 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 398 | 83.06 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 400 | 83.06 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 401 | 83.06 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 402 | 83.06 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 19 |
| 403 | 83.06 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 409 | 83.08 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 6 |
| 411 | 83.08 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 6 |
| 413 | 83.09 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 416 | 83.09 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 417 | 83.09 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 418 | 83.09 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 423 | 83.10 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 427 | 83.10 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 429 | 83.10 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 433 | 83.10 | temperature | 10.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 438 | 83.11 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 440 | 83.11 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 18 | 15 |
| 442 | 83.12 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 6 |
| 446 | 83.12 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 457 | 83.15 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 463 | 83.16 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 5 | 4 |
| 477 | 83.17 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 4 |
| 497 | 83.27 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 6 |
| 501 | 83.29 | temperature | 25.0 | 270 | > th | dose independent | rect. | 9 | 2 |
| 505 | 83.31 | wind | 9.0 | 30 | < th | dose independent | rect. | 15 | 18 |
| 509 | 83.32 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 522 | 83.35 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 524 | 83.35 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 15 | 18 |
| 527 | 83.35 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 15 | 18 |
| 532 | 83.37 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 577 | 83.49 | radiation | 40.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 601 | 83.54 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 18 |
| 621 | 83.58 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 15 |
| 633 | 83.63 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 5 |
| 652 | 83.68 | humidity | 50.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 692 | 83.75 | humidity | 90.0 | 30 | < th | dose independent | rect. | 9 | 6 |
| 693 | 83.76 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 707 | 83.80 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 713 | 83.82 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 717 | 83.83 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 725 | 83.84 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 19 |
| 726 | 83.84 | temperature | 25.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 748 | 83.88 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 9 | 6 |
| 758 | 83.91 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 16 | 3 |
| 760 | 83.92 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 762 | 83.92 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 781 | 83.98 | temperature | 25.0 | 30 | > th | dose independent | rect. | 1 | 8 |
| 785 | 83.99 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 793 | 84.01 | radiation | 40.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 794 | 84.01 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 797 | 84.01 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 811 | 84.04 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 812 | 84.04 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 832 | 84.08 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 834 | 84.08 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 838 | 84.09 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 847 | 84.11 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 848 | 84.11 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 6 | 4 |
| 864 | 84.14 | temperature | 30.0 | 90 | < th | dose independent | sin | 6 | NA |
| 870 | 84.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 20 |
| 873 | 84.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 879 | 84.17 | temperature | 30.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 916 | 84.18 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 976 | 84.23 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 977 | 84.23 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 991 | 84.25 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 993 | 84.25 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 994 | 84.25 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 997 | 84.25 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 998 | 84.25 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 1000 | 84.25 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |