Os10g0169200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0169200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.49 | 0.334 | 464 | -2820 | 0.0907 | 135000 | -0.626 | -825000 | 0.0666 | 3.74 | 995 | 10 | -- | -- |
| 50.13 | 0.332 | 2.9 | -0.00801 | 0.0878 | 2.48 | -0.643 | -- | 0.0668 | 3.77 | 994.8 | 19 | -- | -- |
| 52.68 | 0.338 | 464 | -2820 | 0.0907 | 135000 | -- | -825000 | 0.0666 | 3.74 | 995 | 10 | -- | -- |
| 51.34 | 0.334 | 2.9 | -0.000437 | 0.0892 | 2.53 | -- | -- | 0.069 | 4.17 | 994.7 | 20 | -- | -- |
| 53.07 | 0.339 | 462 | -2800 | -- | 135000 | -- | -825000 | 0.0728 | -- | 995 | 10 | -- | -- |
| 56.22 | 0.352 | 2.9 | 0.00523 | 0.0655 | -- | -0.712 | -- | 0.0615 | 3.8 | -- | -- | -- | -- |
| 57.72 | 0.356 | 2.9 | 0.0155 | 0.0619 | -- | -- | -- | 0.0655 | 4.01 | -- | -- | -- | -- |
| 51.75 | 0.335 | 2.9 | 0.00405 | -- | 2.49 | -- | -- | 0.073 | -- | 994.8 | 20 | -- | -- |
| 51.34 | 0.334 | 2.9 | -- | 0.0892 | 2.53 | -- | -- | 0.0689 | 4.17 | 994.7 | 20 | -- | -- |
| 57.93 | 0.356 | 2.9 | 0.018 | -- | -- | -- | -- | 0.0672 | -- | -- | -- | -- | -- |
| 57.73 | 0.355 | 2.9 | -- | 0.0622 | -- | -- | -- | 0.0638 | 4 | -- | -- | -- | -- |
| 51.75 | 0.335 | 2.9 | -- | -- | 2.49 | -- | -- | 0.0725 | -- | 994.8 | 20 | -- | -- |
| 57.94 | 0.355 | 2.9 | -- | -- | -- | -- | -- | 0.0652 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.88 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 3 | 48.37 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 4 |
| 5 | 49.11 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 6 | 49.20 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 3 |
| 7 | 49.22 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 14 | 49.25 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 15 | 49.25 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 18 | 49.25 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 22 | 49.25 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 31 | 49.25 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 32 | 49.25 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 52 | 49.25 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 55 | 49.25 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 66 | 49.26 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 68 | 49.29 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 69 | 49.30 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 71 | 49.32 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 74 | 49.34 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 80 | 49.38 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 86 | 49.41 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 88 | 49.41 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 89 | 49.41 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 94 | 49.41 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 96 | 49.41 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 101 | 49.41 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 102 | 49.41 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 103 | 49.41 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 107 | 49.41 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 112 | 49.41 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 117 | 49.50 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 120 | 49.54 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 128 | 49.67 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 133 | 49.76 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 138 | 49.81 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 4 | 2 |
| 143 | 49.85 | humidity | 80.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 188 | 49.86 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 191 | 49.86 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 234 | 50.12 | atmosphere | 995.0 | 10 | > th | dose independent | sin | 6 | NA |
| 239 | 50.16 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 242 | 50.30 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 243 | 50.34 | atmosphere | 995.0 | 30 | < th | dose dependent | sin | 6 | NA |
| 244 | 50.34 | atmosphere | 995.0 | 10 | < th | dose dependent | rect. | 18 | 23 |
| 245 | 50.35 | atmosphere | 995.0 | 10 | < th | dose independent | sin | 6 | NA |
| 246 | 50.35 | atmosphere | 995.0 | 30 | < th | dose independent | rect. | 18 | 23 |
| 254 | 50.36 | atmosphere | 995.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 255 | 50.36 | atmosphere | 995.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 542 | 50.63 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 554 | 50.77 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 565 | 50.77 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 757 | 51.48 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 764 | 51.56 | temperature | 30.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 765 | 51.58 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 795 | 51.65 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 799 | 51.71 | atmosphere | 995.0 | 10 | < th | dose dependent | no | NA | NA |