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Os10g0167700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0219) R2 : 0.441
β1 : -0.97 (0.083) R2dD : 0.194 R2D : 0.103
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.3 (0.0979) R2dE : 0.275 R2E : 0.207
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.157 (0.0501) R2dN8 : 0.0193 R2N8 : 0.079
σ : 0.401
deviance : 74.31
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C
peak time of C : --
E
wheather : temperature
threshold : 28.88
memory length : 651
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
58.56 0.36 11.4 -1.07 0.677 -1.2 -0.0318 1.15 0.176 21.8 24.32 11 -- --
59.35 0.362 11.4 -0.902 0.694 -1.43 0.26 -- 0.232 21.9 23.28 6 -- --
58.34 0.358 11.4 -1.06 0.681 -1.22 -- 1.1 0.185 21.8 24.09 10 -- --
59.48 0.362 11.4 -0.908 0.693 -1.45 -- -- 0.238 21.8 23.1 6 -- --
70.19 0.39 11.4 -1.4 -- -1.19 -- 2.4 0.133 -- 29.45 569 -- --
85.54 0.434 11.4 -0.612 0.559 -- 0.0466 -- 0.43 20.7 -- -- -- --
85.54 0.433 11.4 -0.613 0.56 -- -- -- 0.43 20.7 -- -- -- --
74.31 0.401 11.4 -0.97 -- -1.3 -- -- 0.157 -- 28.88 651 -- --
79.41 0.417 11.4 -- 0.652 -1.11 -- -- 0.383 21.5 22.82 6 -- --
103.27 0.475 11.3 -0.614 -- -- -- -- 0.426 -- -- -- -- --
95.44 0.457 11.3 -- 0.562 -- -- -- 0.498 20.6 -- -- -- --
96.44 0.457 11.4 -- -- -0.938 -- -- 0.331 -- 29.25 630 -- --
113.21 0.497 11.3 -- -- -- -- -- 0.494 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 56.72 temperature 25 90 < th dose dependent rect. 13 22
3 56.96 temperature 25 270 < th dose dependent rect. 10 20
6 57.06 temperature 25 270 < th dose dependent rect. 11 18
8 57.14 temperature 25 90 < th dose dependent rect. 15 20
13 57.35 temperature 30 720 < th dose dependent rect. 9 16
19 57.54 temperature 25 10 < th dose dependent rect. 12 20
39 58.00 temperature 30 720 < th dose dependent sin 18 NA
43 58.03 temperature 25 10 < th dose dependent rect. 12 18
49 58.25 temperature 25 90 < th dose dependent rect. 13 18
51 58.29 temperature 25 10 < th dose dependent rect. 14 18
52 58.30 temperature 25 90 < th dose dependent sin 15 NA
57 58.33 temperature 25 90 < th dose dependent rect. 15 16
66 58.41 temperature 25 10 < th dose dependent sin 14 NA
70 58.45 temperature 15 720 > th dose dependent rect. 7 18
72 58.46 temperature 15 720 > th dose dependent rect. 9 16
163 58.97 temperature 25 10 < th dose dependent rect. 5 23
176 59.02 temperature 25 10 < th dose dependent rect. 17 23
178 59.03 temperature 25 10 < th dose dependent rect. 9 23
180 59.05 temperature 25 10 < th dose dependent no NA NA
191 59.11 temperature 25 10 < th dose dependent rect. 23 23
196 59.12 temperature 25 10 < th dose dependent rect. 19 23
206 59.16 temperature 25 10 < th dose dependent rect. 7 23
229 59.27 temperature 25 10 < th dose dependent rect. 3 23
230 59.28 temperature 25 10 < th dose dependent rect. 21 23
239 59.31 temperature 15 720 > th dose dependent sin 19 NA
242 59.32 wind 1 43200 > th dose independent rect. 24 1
325 59.59 humidity 70 43200 < th dose dependent rect. 5 7
346 59.65 temperature 25 30 < th dose dependent rect. 1 23
352 59.67 humidity 70 43200 < th dose dependent rect. 22 14
357 59.68 humidity 90 14400 > th dose dependent rect. 5 1
361 59.69 humidity 70 43200 < th dose dependent rect. 11 1
380 59.76 temperature 15 90 > th dose dependent sin 13 NA
383 59.77 wind 7 43200 < th dose dependent rect. 13 2
394 59.81 humidity 80 43200 < th dose dependent rect. 8 1
399 59.83 wind 1 43200 > th dose dependent rect. 14 1
404 59.84 wind 1 43200 > th dose dependent rect. 13 3
424 59.89 humidity 70 43200 > th dose independent rect. 4 6
442 59.94 humidity 70 43200 < th dose independent rect. 4 7
464 59.99 wind 3 43200 > th dose independent rect. 13 1
466 59.99 radiation 1 43200 < th dose independent rect. 18 11
480 60.02 temperature 15 10 > th dose dependent sin 12 NA
491 60.04 radiation 20 14400 > th dose dependent rect. 17 14
522 60.09 wind 5 43200 < th dose independent rect. 14 2
547 60.12 humidity 60 43200 > th dose independent rect. 21 16
589 60.17 radiation 20 14400 > th dose dependent rect. 6 1
651 60.23 humidity 70 43200 < th dose independent sin 4 NA
681 60.27 humidity 50 43200 > th dose independent rect. 7 3
743 60.36 humidity 70 43200 < th dose dependent sin 7 NA
744 60.36 humidity 60 43200 < th dose dependent sin 5 NA
754 60.37 humidity 60 43200 < th dose independent rect. 8 2
755 60.37 wind 5 43200 < th dose independent rect. 14 6
810 60.42 humidity 60 43200 > th dose independent sin 7 NA
843 60.45 humidity 70 43200 > th dose independent sin 4 NA
844 60.45 humidity 60 43200 < th dose independent rect. 19 18
877 60.48 radiation 20 14400 < th dose independent rect. 18 12
892 60.50 radiation 1 14400 < th dose dependent rect. 4 1
903 60.51 temperature 30 720 < th dose dependent rect. 15 8
911 60.52 wind 5 43200 > th dose independent rect. 14 6
957 60.57 humidity 60 43200 < th dose independent sin 7 NA
976 60.59 humidity 70 43200 < th dose independent rect. 24 17