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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0167200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cytochrome P450 76C2 (EC 1.14.-.-).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.95 (0.0289) R2 : 0.00105
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0422 (0.0609) R2dN8 : 0.00136 R2N8 : 0.00105
σ : 0.545
deviance : 136.25
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
128.39 0.532 2.94 0.243 0.187 1.53 0.345 1.47 0.0265 12.5 19.9 106 -- --
128.96 0.529 2.92 0.259 0.189 1.01 0.251 -- 0.0397 12.7 20 57 -- --
128.85 0.529 2.94 0.262 0.181 1.59 -- 1.46 0.0323 12.7 19.81 110 -- --
129.13 0.529 2.93 0.26 0.175 1.04 -- -- 0.0294 12.5 19.72 37 -- --
130.87 0.533 2.94 0.241 -- 1.56 -- 1.47 0.0222 -- 19.6 116 -- --
134.41 0.544 2.94 0.0938 0.124 -- 0.374 -- -0.0306 11.6 -- -- -- --
134.99 0.544 2.94 0.11 0.125 -- -- -- -0.0285 12.3 -- -- -- --
130.96 0.533 2.93 0.242 -- 0.981 -- -- 0.0177 -- 19.5 37 -- --
130.77 0.533 2.94 -- 0.16 0.867 -- -- -0.00786 12.3 19.7 37 -- --
135.96 0.545 2.94 0.106 -- -- -- -- -0.0305 -- -- -- -- --
135.3 0.544 2.94 -- 0.123 -- -- -- -0.0407 12.3 -- -- -- --
132.37 0.536 2.94 -- -- 0.825 -- -- -0.0146 -- 19.5 43 -- --
136.25 0.545 2.95 -- -- -- -- -- -0.0422 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 118.66 wind 7.0 90 > th dose dependent rect. 8 1
2 118.72 wind 7.0 90 > th dose independent rect. 8 1
7 119.10 wind 7.0 90 > th dose independent rect. 4 5
19 122.99 humidity 80.0 90 < th dose dependent rect. 2 3
20 123.10 humidity 80.0 90 < th dose independent rect. 2 2
21 123.10 humidity 90.0 10 < th dose dependent rect. 3 1
37 123.98 humidity 90.0 10 < th dose independent rect. 3 1
42 124.54 wind 3.0 10 > th dose dependent rect. 3 1
110 126.94 humidity 80.0 270 < th dose independent rect. 24 4
114 127.02 humidity 80.0 270 < th dose dependent rect. 24 4
118 127.08 wind 9.0 720 < th dose dependent rect. 20 13
120 127.11 temperature 30.0 30 > th dose dependent rect. 12 2
121 127.13 wind 3.0 10 > th dose independent rect. 3 1
150 127.32 temperature 20.0 90 < th dose dependent rect. 2 21
155 127.38 wind 9.0 720 < th dose dependent rect. 24 8
157 127.42 wind 3.0 720 < th dose independent rect. 21 12
158 127.42 wind 9.0 720 < th dose dependent rect. 20 15
159 127.42 temperature 20.0 90 < th dose dependent rect. 2 18
173 127.56 wind 1.0 720 > th dose dependent rect. 23 11
185 127.64 wind 3.0 720 < th dose independent rect. 23 10
186 127.64 wind 3.0 720 > th dose independent rect. 23 11
200 127.70 temperature 20.0 30 < th dose dependent sin 3 NA
208 127.73 temperature 20.0 90 < th dose dependent rect. 23 21
214 127.76 radiation 40.0 10 > th dose dependent rect. 14 1
256 127.78 temperature 20.0 90 < th dose dependent rect. 2 14
257 127.81 wind 1.0 720 > th dose dependent rect. 2 2
265 127.84 temperature 20.0 90 < th dose dependent rect. 2 11
308 127.99 wind 3.0 720 < th dose independent sin 8 NA
316 128.01 temperature 15.0 1440 > th dose independent rect. 10 12
324 128.05 wind 3.0 720 > th dose independent sin 8 NA
334 128.07 temperature 15.0 1440 > th dose independent rect. 6 1
347 128.08 temperature 20.0 270 < th dose dependent rect. 5 23
361 128.13 temperature 20.0 90 < th dose dependent rect. 23 17
367 128.15 wind 1.0 720 > th dose dependent rect. 18 16
381 128.20 temperature 20.0 90 < th dose dependent rect. 23 13
386 128.21 temperature 15.0 1440 > th dose independent rect. 7 3
391 128.22 wind 1.0 720 > th dose dependent sin 8 NA
392 128.22 wind 7.0 720 < th dose dependent sin 8 NA
400 128.25 temperature 20.0 90 < th dose dependent rect. 10 20
424 128.31 wind 3.0 720 > th dose independent rect. 18 16
462 128.39 temperature 20.0 90 < th dose dependent rect. 2 1
465 128.39 temperature 20.0 90 < th dose dependent rect. 18 22
508 128.45 temperature 20.0 90 < th dose dependent rect. 18 19
516 128.47 temperature 20.0 90 < th dose dependent no NA NA
517 128.47 temperature 20.0 90 < th dose dependent rect. 14 23
552 128.54 temperature 15.0 1440 > th dose independent rect. 4 11
558 128.55 temperature 15.0 1440 > th dose independent rect. 19 12
566 128.56 temperature 15.0 1440 > th dose independent rect. 6 9
577 128.57 temperature 15.0 1440 > th dose independent rect. 7 6
588 128.58 precipitation 0.1 1440 > th dose independent rect. 4 14
589 128.58 precipitation 0.1 1440 < th dose independent rect. 4 14
590 128.58 temperature 15.0 1440 > th dose independent rect. 13 18
594 128.58 precipitation 0.1 1440 < th dose dependent rect. 4 14
614 128.60 precipitation 0.1 1440 > th dose dependent rect. 1 17
621 128.61 temperature 15.0 1440 > th dose independent rect. 4 18
623 128.61 temperature 15.0 1440 > th dose independent rect. 10 21
624 128.61 temperature 20.0 90 < th dose dependent rect. 2 3
642 128.63 humidity 50.0 43200 > th dose independent rect. 6 1
643 128.63 humidity 90.0 720 > th dose independent rect. 4 13
653 128.64 precipitation 0.1 1440 < th dose independent rect. 1 17
656 128.64 precipitation 0.1 1440 < th dose dependent rect. 1 17
676 128.65 temperature 20.0 30 < th dose dependent rect. 5 23
693 128.67 temperature 15.0 1440 > th dose independent rect. 17 14
694 128.67 temperature 15.0 720 > th dose independent rect. 2 18
751 128.70 temperature 15.0 1440 > th dose independent rect. 10 5
767 128.71 precipitation 0.1 1440 > th dose independent rect. 1 17
784 128.72 temperature 15.0 720 > th dose independent rect. 6 17
855 128.78 temperature 15.0 1440 > th dose independent rect. 4 3
872 128.79 wind 3.0 720 < th dose dependent rect. 24 5
881 128.80 precipitation 0.1 1440 < th dose independent rect. 4 7
884 128.80 temperature 15.0 720 > th dose independent rect. 4 22
887 128.80 precipitation 0.1 1440 < th dose dependent rect. 4 7
897 128.81 precipitation 0.1 1440 > th dose dependent rect. 4 9
912 128.82 precipitation 0.1 1440 > th dose independent rect. 4 9
913 128.82 precipitation 0.1 1440 < th dose independent rect. 4 9
920 128.82 precipitation 0.1 1440 < th dose dependent rect. 4 9
945 128.84 precipitation 0.1 1440 < th dose independent rect. 1 10
948 128.84 precipitation 0.1 1440 < th dose dependent rect. 1 10
954 128.85 precipitation 0.1 1440 > th dose independent rect. 4 7
962 128.85 precipitation 0.1 1440 > th dose dependent rect. 4 7
976 128.86 precipitation 0.1 1440 < th dose independent rect. 1 12
981 128.86 wind 9.0 1440 > th dose dependent rect. 22 12
982 128.86 precipitation 0.1 1440 < th dose dependent rect. 1 12
994 128.87 temperature 15.0 1440 > th dose independent rect. 17 22