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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0164600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.83 (0.0147) R2 : 0.00182
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0281 (0.0309) R2dN8 : 0.00235 R2N8 : 0.00182
σ : 0.276
deviance : 34.97
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
32.74 0.266 0.945 -3.89 0.0428 -362 -0.141 -764 0.0443 20.8 15 90 -- --
34.86 0.277 2.83 0.0268 0.0368 0.00176 -0.0872 -- 0.0322 18.1 15.11 33 -- --
32.8 0.267 0.947 -3.88 0.0438 -362 -- -763 0.0451 20.3 15 89 -- --
33.93 0.271 2.82 0.0728 0.0334 0.516 -- -- 0.0438 19.4 17.72 34 -- --
32.9 0.267 0.949 -3.87 -- -362 -- -764 0.0445 -- 15.01 88 -- --
34.86 0.277 2.83 0.0267 0.0368 -- -0.0872 -- 0.0322 18.1 -- -- -- --
34.88 0.277 2.83 0.0275 0.0366 -- -- -- 0.0318 18.6 -- -- -- --
33.9 0.271 2.82 0.0871 -- 0.486 -- -- 0.0497 -- 19 52 -- --
33.95 0.271 2.83 -- 0.0393 0.488 -- -- 0.0349 19.4 17.56 156 -- --
34.95 0.276 2.83 0.0266 -- -- -- -- 0.0311 -- -- -- -- --
34.9 0.276 2.83 -- 0.0362 -- -- -- 0.0288 18.7 -- -- -- --
34.01 0.272 2.83 -- -- 0.487 -- -- 0.0345 -- 17.4 159 -- --
34.97 0.276 2.83 -- -- -- -- -- 0.0281 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.39 temperature 10.0 1440 > th dose independent rect. 21 1
4 28.39 temperature 30.0 1440 < th dose independent rect. 21 1
8 28.39 humidity 50.0 1440 > th dose independent rect. 21 1
14 28.39 atmosphere 995.0 1440 > th dose independent rect. 21 1
15 28.39 radiation 1.0 1440 < th dose independent rect. 21 1
35 28.39 temperature 10.0 1440 > th dose independent rect. 22 23
38 28.39 radiation 30.0 1440 < th dose dependent rect. 21 1
42 28.43 temperature 25.0 30 > th dose independent rect. 20 1
43 28.43 radiation 40.0 14400 < th dose dependent rect. 21 1
44 28.44 atmosphere 1005.0 30 > th dose dependent rect. 20 1
49 28.47 wind 3.0 30 > th dose independent rect. 20 1
50 28.47 temperature 20.0 30 > th dose dependent rect. 20 1
52 28.48 humidity 80.0 30 > th dose independent rect. 20 1
53 28.48 humidity 90.0 30 < th dose independent rect. 20 1
54 28.48 atmosphere 1005.0 30 > th dose independent rect. 20 1
59 28.51 wind 5.0 30 < th dose independent rect. 20 1
67 28.52 temperature 10.0 30 > th dose independent rect. 20 1
69 28.52 temperature 30.0 30 < th dose independent rect. 20 1
70 28.52 humidity 50.0 30 > th dose independent rect. 20 1
73 28.52 atmosphere 995.0 30 > th dose independent rect. 20 1
75 28.52 atmosphere 1010.0 30 < th dose independent rect. 20 1
77 28.52 radiation 1.0 30 < th dose independent rect. 20 1
82 28.52 precipitation 0.1 30 < th dose independent rect. 20 1
83 28.52 temperature 10.0 30 > th dose independent rect. 21 23
84 28.52 wind 1.0 30 > th dose dependent rect. 20 1
85 28.52 radiation 1.0 30 < th dose dependent rect. 20 1
90 28.52 precipitation 0.1 30 < th dose dependent rect. 20 1
91 28.53 humidity 50.0 30 > th dose dependent rect. 20 1
94 28.55 wind 9.0 30 < th dose dependent rect. 20 1
98 28.62 humidity 90.0 30 < th dose dependent rect. 20 1
102 28.67 atmosphere 1015.0 30 < th dose dependent rect. 20 1
103 28.68 wind 9.0 1440 < th dose independent rect. 21 1
105 28.73 temperature 30.0 30 < th dose dependent rect. 20 1
121 28.95 wind 9.0 30 < th dose independent rect. 21 23
169 30.25 precipitation 0.1 30 < th dose independent rect. 21 23
170 30.25 precipitation 0.1 30 < th dose dependent rect. 21 23
172 30.43 atmosphere 995.0 30 > th dose independent rect. 21 23
179 30.71 temperature 25.0 30 > th dose dependent rect. 20 3
201 31.22 atmosphere 1005.0 10 > th dose dependent rect. 20 3
222 31.59 humidity 50.0 30 > th dose independent rect. 21 23
225 31.61 precipitation 0.1 1440 < th dose independent rect. 21 1
227 31.61 precipitation 0.1 1440 < th dose dependent rect. 21 1
230 31.64 atmosphere 1015.0 720 < th dose independent rect. 1 8
254 31.66 temperature 25.0 10 > th dose dependent rect. 20 9
258 31.68 atmosphere 1015.0 30 < th dose independent rect. 21 23
269 31.77 temperature 10.0 30 > th dose dependent rect. 21 23
295 32.07 atmosphere 1015.0 720 < th dose independent rect. 21 12
301 32.14 atmosphere 1015.0 720 < th dose independent rect. 23 10
313 32.20 temperature 10.0 10 > th dose dependent rect. 23 21
315 32.21 humidity 90.0 10 < th dose independent rect. 20 3
318 32.22 temperature 30.0 30 < th dose independent rect. 21 23
319 32.25 temperature 15.0 720 > th dose independent rect. 2 7
320 32.26 temperature 15.0 720 > th dose independent rect. 5 4
324 32.31 wind 7.0 10 < th dose independent rect. 23 21
328 32.33 temperature 15.0 90 > th dose independent rect. 23 20
335 32.37 wind 3.0 30 > th dose independent rect. 20 3
364 32.46 humidity 80.0 10 > th dose independent rect. 20 3
368 32.48 temperature 15.0 270 > th dose independent rect. 5 12
373 32.50 temperature 15.0 720 > th dose independent rect. 21 12
376 32.53 temperature 15.0 4320 > th dose independent rect. 12 1
377 32.53 atmosphere 1015.0 720 < th dose independent rect. 21 20
382 32.55 atmosphere 1015.0 1440 < th dose independent rect. 15 4
389 32.57 temperature 15.0 720 > th dose independent rect. 21 16
391 32.58 atmosphere 1015.0 1440 < th dose independent rect. 17 2
398 32.59 temperature 20.0 30 < th dose dependent rect. 1 12
415 32.61 wind 9.0 30 < th dose dependent rect. 21 23
416 32.62 atmosphere 1015.0 720 < th dose independent rect. 12 21
438 32.66 humidity 90.0 90 < th dose independent rect. 4 15
452 32.68 temperature 15.0 720 > th dose independent rect. 5 9
460 32.69 humidity 90.0 10 < th dose independent rect. 6 14
461 32.69 atmosphere 1015.0 720 < th dose independent rect. 23 18
466 32.70 radiation 1.0 270 < th dose independent rect. 7 4
468 32.70 temperature 15.0 720 > th dose independent rect. 9 8
471 32.70 radiation 1.0 270 < th dose dependent rect. 7 4
480 32.71 humidity 90.0 10 > th dose independent rect. 8 4
489 32.71 humidity 90.0 30 > th dose dependent rect. 8 4
496 32.72 temperature 15.0 4320 > th dose independent rect. 15 1
497 32.72 atmosphere 1015.0 1440 < th dose independent rect. 13 1
499 32.72 radiation 1.0 270 < th dose independent rect. 9 1
504 32.72 radiation 1.0 90 < th dose independent rect. 10 3
516 32.72 wind 9.0 270 > th dose dependent rect. 9 1
517 32.72 radiation 1.0 270 < th dose dependent rect. 9 1
526 32.72 radiation 1.0 90 < th dose dependent rect. 10 3
538 32.72 temperature 20.0 90 < th dose dependent rect. 9 8
541 32.72 temperature 10.0 90 > th dose dependent rect. 5 14
544 32.73 temperature 15.0 90 > th dose independent sin 0 NA
546 32.73 temperature 15.0 270 > th dose independent sin 5 NA
547 32.73 temperature 15.0 720 < th dose independent sin 22 NA
550 32.73 wind 7.0 270 > th dose independent rect. 7 1
551 32.73 temperature 15.0 720 < th dose independent rect. 1 1
555 32.73 temperature 20.0 90 < th dose independent rect. 10 1
558 32.73 temperature 20.0 10 < th dose independent rect. 11 1
566 32.73 humidity 90.0 90 > th dose independent rect. 10 1
570 32.73 atmosphere 1015.0 1440 > th dose independent rect. 12 1
575 32.73 precipitation 0.1 270 > th dose independent rect. 9 1
600 32.73 atmosphere 1015.0 720 > th dose independent rect. 24 2
792 32.73 temperature 15.0 720 < th dose dependent sin 22 NA
797 32.73 wind 7.0 10 > th dose dependent rect. 12 1
799 32.73 temperature 15.0 720 < th dose dependent rect. 1 1
803 32.73 temperature 20.0 90 < th dose dependent rect. 10 1
806 32.73 temperature 20.0 10 < th dose dependent rect. 11 1
814 32.73 humidity 90.0 90 > th dose dependent rect. 10 1
818 32.73 atmosphere 1015.0 1440 > th dose dependent rect. 12 1
820 32.73 atmosphere 1015.0 720 > th dose dependent rect. 24 1
823 32.73 precipitation 0.1 270 > th dose dependent rect. 9 1
909 32.73 humidity 90.0 270 > th dose dependent rect. 8 4
968 32.73 atmosphere 1015.0 1440 > th dose dependent rect. 15 6