Os10g0162300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, C2H2-type domain containing protein.
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Os10g0162300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, C2H2-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 153.37 | 0.582 | 7.69 | 0.474 | 2.51 | -1.5 | 0.981 | 1.34 | -0.684 | 6.16 | 20.3 | 1659 | -- | -- |
| 158.26 | 0.586 | 7.68 | 0.418 | 2.54 | -1.7 | 1.06 | -- | -0.624 | 6.12 | 20.31 | 1621 | -- | -- |
| 155.7 | 0.581 | 7.69 | 0.48 | 2.51 | -1.52 | -- | 1.31 | -0.688 | 6.15 | 20.2 | 1635 | -- | -- |
| 158.84 | 0.587 | 7.72 | 0.275 | 2.51 | -1.7 | -- | -- | -0.736 | 6.14 | 20.2 | 1566 | -- | -- |
| 315.38 | 0.827 | 7.79 | 0.339 | -- | -1.86 | -- | 0.942 | -0.485 | -- | 25.8 | 376 | -- | -- |
| 213.23 | 0.685 | 7.81 | -0.455 | 2.5 | -- | 1.21 | -- | -1.09 | 6.17 | -- | -- | -- | -- |
| 216.81 | 0.69 | 7.81 | -0.443 | 2.51 | -- | -- | -- | -1.1 | 6.14 | -- | -- | -- | -- |
| 313.16 | 0.824 | 7.73 | 0.118 | -- | -1.87 | -- | -- | -0.461 | -- | 25.84 | 375 | -- | -- |
| 159.37 | 0.588 | 7.76 | -- | 2.53 | -1.69 | -- | -- | -0.807 | 6.11 | 19.68 | 1633 | -- | -- |
| 542.86 | 1.09 | 7.86 | -0.372 | -- | -- | -- | -- | -1.04 | -- | -- | -- | -- | -- |
| 221.98 | 0.697 | 7.8 | -- | 2.5 | -- | -- | -- | -1.05 | 6.15 | -- | -- | -- | -- |
| 313.52 | 0.825 | 7.73 | -- | -- | -1.86 | -- | -- | -0.477 | -- | 25.86 | 375 | -- | -- |
| 546.51 | 1.09 | 7.85 | -- | -- | -- | -- | -- | -1 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.46 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 2 | 151.47 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 3 | 151.68 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 22 |
| 5 | 152.05 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 15 |
| 7 | 152.09 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 15 |
| 14 | 152.30 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 20 | 152.51 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 27 | 152.56 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 39 | 152.75 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 42 | 152.84 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 104 | 153.84 | wind | 3 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 117 | 153.95 | humidity | 80 | 14400 | > th | dose dependent | rect. | 2 | 6 |
| 155 | 154.34 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 196 | 154.69 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 213 | 154.95 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 222 | 155.02 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 3 |
| 245 | 155.18 | humidity | 50 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 278 | 155.40 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 3 |
| 304 | 155.60 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 22 |
| 313 | 155.67 | wind | 9 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 342 | 155.83 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 348 | 155.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 8 |
| 354 | 155.90 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 20 |
| 404 | 156.19 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 415 | 156.24 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 8 |
| 428 | 156.31 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 436 | 156.33 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 10 |
| 454 | 156.43 | humidity | 90 | 14400 | > th | dose dependent | sin | 2 | NA |
| 461 | 156.48 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 465 | 156.53 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 469 | 156.55 | wind | 3 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 470 | 156.55 | humidity | 80 | 14400 | > th | dose dependent | rect. | 24 | 12 |
| 525 | 156.92 | wind | 3 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 535 | 156.97 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 582 | 157.24 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 592 | 157.31 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 14 |
| 600 | 157.40 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 607 | 157.41 | humidity | 80 | 14400 | > th | dose dependent | sin | 7 | NA |
| 615 | 157.43 | temperature | 20 | 270 | > th | dose independent | rect. | 16 | 23 |
| 641 | 157.59 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 649 | 157.63 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 23 |
| 657 | 157.67 | temperature | 15 | 90 | > th | dose dependent | sin | 8 | NA |
| 689 | 157.85 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 22 |
| 694 | 157.89 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 713 | 157.96 | wind | 3 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 763 | 158.15 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 764 | 158.15 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 776 | 158.19 | temperature | 25 | 1440 | < th | dose dependent | sin | 7 | NA |
| 786 | 158.24 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 14 |
| 799 | 158.27 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 802 | 158.28 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 6 |
| 812 | 158.30 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 6 |
| 823 | 158.32 | wind | 1 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 847 | 158.45 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 7 |
| 872 | 158.52 | wind | 3 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 897 | 158.59 | temperature | 20 | 270 | < th | dose independent | rect. | 10 | 23 |
| 901 | 158.61 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 907 | 158.63 | wind | 3 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 919 | 158.66 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 932 | 158.74 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 24 | 14 |
| 933 | 158.74 | temperature | 20 | 270 | < th | dose independent | rect. | 18 | 23 |
| 937 | 158.75 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 938 | 158.75 | temperature | 20 | 270 | > th | dose independent | rect. | 19 | 14 |
| 946 | 158.79 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 958 | 158.84 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 3 | 8 |
| 972 | 158.86 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 2 | 10 |
| 976 | 158.87 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 2 | 10 |
| 979 | 158.87 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 8 | NA |
| 994 | 158.93 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 3 | 8 |