Os10g0162000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Non-protein coding transcript, uncharacterized transcript.
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Os10g0162000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Non-protein coding transcript, uncharacterized transcript.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 91.79 | 0.45 | 9.35 | -0.539 | 1.56 | -0.718 | 1.22 | -0.38 | -0.564 | 9.83 | 21.7 | 1446 | -- | -- |
| 92.11 | 0.447 | 9.34 | -0.432 | 1.56 | -0.7 | 1.23 | -- | -0.539 | 9.82 | 21.73 | 1417 | -- | -- |
| 97.46 | 0.46 | 9.36 | -0.504 | 1.55 | -0.697 | -- | -0.382 | -0.568 | 9.89 | 21.78 | 1478 | -- | -- |
| 97.83 | 0.461 | 9.34 | -0.384 | 1.55 | -0.694 | -- | -- | -0.537 | 9.91 | 21.7 | 1479 | -- | -- |
| 196.66 | 0.653 | 9.34 | -0.408 | -- | -1.14 | -- | -0.245 | -0.34 | -- | 24.9 | 735 | -- | -- |
| 107.67 | 0.486 | 9.39 | -0.716 | 1.57 | -- | 1.19 | -- | -0.751 | 9.89 | -- | -- | -- | -- |
| 113.07 | 0.498 | 9.39 | -0.669 | 1.56 | -- | -- | -- | -0.748 | 9.96 | -- | -- | -- | -- |
| 196.8 | 0.653 | 9.33 | -0.332 | -- | -1.16 | -- | -- | -0.319 | -- | 24.9 | 740 | -- | -- |
| 101.04 | 0.468 | 9.33 | -- | 1.52 | -0.823 | -- | -- | -0.476 | 10 | 21.52 | 1957 | -- | -- |
| 259.47 | 0.753 | 9.43 | -0.688 | -- | -- | -- | -- | -0.748 | -- | -- | -- | -- | -- |
| 124.88 | 0.523 | 9.37 | -- | 1.56 | -- | -- | -- | -0.673 | 9.99 | -- | -- | -- | -- |
| 199.41 | 0.658 | 9.32 | -- | -- | -1.21 | -- | -- | -0.257 | -- | 24.85 | 737 | -- | -- |
| 271.95 | 0.77 | 9.41 | -- | -- | -- | -- | -- | -0.672 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.05 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 2 | 87.15 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 8 | 87.74 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 2 | 4 |
| 32 | 89.39 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 2 |
| 48 | 89.99 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 58 | 90.07 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 62 | 90.11 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 77 | 90.58 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 78 | 90.59 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 9 |
| 90 | 90.88 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 100 | 91.01 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 12 |
| 101 | 91.05 | wind | 1.0 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 113 | 91.19 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 4 |
| 120 | 91.21 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 125 | 91.24 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 134 | 91.30 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 143 | 91.35 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 163 | 91.54 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 167 | 91.59 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 168 | 91.60 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 24 | 3 |
| 175 | 91.66 | wind | 1.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 181 | 91.71 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 190 | 91.72 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 222 | 91.85 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 225 | 91.86 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 250 | 91.96 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 274 | 92.02 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 320 | 92.14 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 332 | 92.18 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 377 | 92.30 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 403 | 92.36 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 5 |
| 459 | 92.44 | wind | 3.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 498 | 92.53 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 17 |
| 499 | 92.54 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 516 | 92.57 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 524 | 92.59 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 534 | 92.61 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 4 |
| 539 | 92.62 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 5 |
| 616 | 92.78 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 671 | 92.87 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 706 | 92.93 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 710 | 92.94 | temperature | 20.0 | 1440 | > th | dose independent | sin | 10 | NA |
| 711 | 92.94 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 714 | 92.94 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 7 |
| 725 | 92.96 | wind | 1.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 726 | 92.96 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 7 |
| 784 | 93.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 4 |
| 816 | 93.12 | temperature | 20.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 843 | 93.17 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 877 | 93.22 | wind | 1.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 894 | 93.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 898 | 93.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 4 |
| 915 | 93.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 925 | 93.29 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 11 | NA |
| 946 | 93.32 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 955 | 93.33 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 956 | 93.33 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 17 |
| 987 | 93.38 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 999 | 93.39 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 20 | 14 |