Os10g0161700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os10g0161700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.34 | 0.201 | 10.1 | 0.985 | 0.662 | -0.0873 | 0.167 | 1.11 | 0.129 | 6.51 | 20.5 | 2715 | -- | -- |
| 19.9 | 0.208 | 10.1 | 0.825 | 0.653 | -0.282 | 0.259 | -- | 0.137 | 6.5 | 22.8 | 11709 | -- | -- |
| 18.41 | 0.2 | 10.1 | 0.991 | 0.663 | -0.0886 | -- | 1.12 | 0.13 | 6.49 | 20.54 | 2718 | -- | -- |
| 20.05 | 0.209 | 10.1 | 0.838 | 0.657 | -0.289 | -- | -- | 0.148 | 6.5 | 22.71 | 12028 | -- | -- |
| 40.93 | 0.298 | 10.1 | 1.08 | -- | -0.108 | -- | 1.14 | 0.167 | -- | 21.6 | 3143 | -- | -- |
| 21.83 | 0.219 | 10.1 | 0.635 | 0.654 | -- | 0.255 | -- | 0.0133 | 6.56 | -- | -- | -- | -- |
| 22 | 0.22 | 10.1 | 0.639 | 0.655 | -- | -- | -- | 0.0125 | 6.55 | -- | -- | -- | -- |
| 41.08 | 0.299 | 10.1 | 1.07 | -- | -0.498 | -- | -- | 0.139 | -- | 14.7 | 46755 | -- | -- |
| 27.4 | 0.244 | 10.2 | -- | 0.613 | 0.345 | -- | -- | -0.146 | 6.76 | 21 | 47520 | -- | -- |
| 44.36 | 0.311 | 10.1 | 0.655 | -- | -- | -- | -- | 0.0259 | -- | -- | -- | -- | -- |
| 32.75 | 0.268 | 10.1 | -- | 0.664 | -- | -- | -- | -0.0587 | 6.49 | -- | -- | -- | -- |
| 49.57 | 0.328 | 10.2 | -- | -- | 0.362 | -- | -- | -0.173 | -- | 22.1 | 47520 | -- | -- |
| 55.67 | 0.348 | 10.1 | -- | -- | -- | -- | -- | -0.0467 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.22 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 4 | 17.31 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 12 | 17.52 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 34 | 17.62 | humidity | 90.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 36 | 17.62 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 52 | 17.65 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 63 | 17.66 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 64 | 17.66 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 82 | 17.70 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 87 | 17.70 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 102 | 17.71 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 109 | 17.73 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 132 | 17.76 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 133 | 17.76 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 134 | 17.76 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 154 | 17.76 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 164 | 17.78 | humidity | 90.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 166 | 17.78 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 174 | 17.78 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 178 | 17.79 | wind | 3.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 194 | 17.80 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 195 | 17.80 | wind | 3.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 295 | 17.89 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 310 | 17.90 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 12 |
| 326 | 17.91 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 338 | 17.92 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 341 | 17.93 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 344 | 17.93 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 358 | 17.94 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 4 |
| 371 | 17.94 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 12 |
| 379 | 17.95 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 5 |
| 396 | 17.96 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 419 | 17.96 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 437 | 17.97 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 487 | 18.00 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 1 |
| 494 | 18.00 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 510 | 18.00 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 518 | 18.00 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 5 | 15 |
| 520 | 18.00 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 536 | 18.01 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 551 | 18.01 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 15 |
| 562 | 18.02 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 7 |
| 576 | 18.02 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 577 | 18.02 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 6 | 5 |
| 607 | 18.03 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 16 | 17 |
| 628 | 18.04 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 630 | 18.04 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 654 | 18.04 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 656 | 18.04 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 13 |
| 722 | 18.06 | wind | 3.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 743 | 18.07 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 747 | 18.07 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 753 | 18.07 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 789 | 18.08 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 791 | 18.08 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 817 | 18.08 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 23 |
| 847 | 18.09 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 5 | 11 |
| 866 | 18.09 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 898 | 18.10 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 902 | 18.10 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 929 | 18.11 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 7 |
| 943 | 18.11 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 11 | 12 |
| 946 | 18.11 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 948 | 18.11 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 5 | 18 |
| 955 | 18.11 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 957 | 18.11 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 7 | 6 |
| 960 | 18.11 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 9 |