Os10g0160100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 17 protein.
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Os10g0160100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 17 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 169.48 | 0.612 | 4.17 | -6.14 | 0.3 | 49.2 | -1.17 | -286 | -0.255 | 18.4 | 995.8 | 1291 | -- | -- |
| 188.2 | 0.644 | 3.25 | -0.618 | 0.377 | 0.0458 | -0.832 | -- | -0.276 | 18.9 | 995.8 | 1756 | -- | -- |
| 172.06 | 0.611 | 4.12 | -5.82 | 0.316 | 49.3 | -- | -286 | -0.254 | 19.6 | 996.1 | 1249 | -- | -- |
| 173.76 | 0.614 | 3.24 | -0.735 | 0.359 | 1.94 | -- | -- | -0.263 | 19 | 994.7 | 479 | -- | -- |
| 177.34 | 0.62 | 4.14 | -5.98 | -- | 49.4 | -- | -287 | -0.263 | -- | 995.9 | 1251 | -- | -- |
| 188.2 | 0.643 | 3.25 | -0.617 | 0.378 | -- | -0.829 | -- | -0.276 | 18.9 | -- | -- | -- | -- |
| 189.55 | 0.645 | 3.25 | -0.605 | 0.381 | -- | -- | -- | -0.28 | 19.8 | -- | -- | -- | -- |
| 178.52 | 0.622 | 3.24 | -0.656 | -- | 2.19 | -- | -- | -0.266 | -- | 994.6 | 483 | -- | -- |
| 184.23 | 0.632 | 3.23 | -- | 0.326 | 1.96 | -- | -- | -0.191 | 19.5 | 994.7 | 495 | -- | -- |
| 197.37 | 0.656 | 3.25 | -0.61 | -- | -- | -- | -- | -0.285 | -- | -- | -- | -- | -- |
| 199.21 | 0.66 | 3.24 | -- | 0.385 | -- | -- | -- | -0.213 | 19.6 | -- | -- | -- | -- |
| 189.85 | 0.642 | 3.22 | -- | -- | 2.09 | -- | -- | -0.194 | -- | 994.6 | 493 | -- | -- |
| 207.19 | 0.672 | 3.23 | -- | -- | -- | -- | -- | -0.218 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 157.78 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 20 | 5 |
| 10 | 160.27 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 19 | 2 |
| 14 | 160.84 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 18 | 5 |
| 39 | 163.11 | atmosphere | 995 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 62 | 163.11 | atmosphere | 995 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 139 | 165.15 | radiation | 1 | 720 | < th | dose dependent | rect. | 6 | 1 |
| 148 | 165.97 | atmosphere | 995 | 720 | > th | dose independent | sin | 9 | NA |
| 150 | 166.32 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 19 | 6 |
| 172 | 167.20 | atmosphere | 995 | 1440 | < th | dose independent | sin | 8 | NA |
| 178 | 167.42 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 22 | 2 |
| 181 | 167.44 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 11 | 16 |
| 241 | 167.97 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 24 | 1 |
| 245 | 168.01 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 1 | 17 |
| 260 | 168.30 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 22 | 1 |
| 273 | 168.44 | atmosphere | 995 | 1440 | < th | dose dependent | sin | 8 | NA |
| 275 | 168.48 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 11 | 18 |
| 284 | 168.58 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 7 | 16 |
| 349 | 168.83 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 399 | 168.90 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 7 | 2 |
| 409 | 169.04 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 412 | 169.09 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 19 | 23 |
| 448 | 169.45 | temperature | 30 | 720 | < th | dose independent | rect. | 11 | 7 |
| 450 | 169.46 | atmosphere | 995 | 720 | > th | dose independent | sin | 19 | NA |
| 456 | 169.54 | temperature | 30 | 720 | > th | dose independent | rect. | 12 | 3 |
| 460 | 169.61 | temperature | 30 | 720 | < th | dose independent | rect. | 6 | 17 |
| 461 | 169.61 | wind | 1 | 10 | < th | dose dependent | rect. | 1 | 2 |
| 468 | 169.65 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 536 | 169.89 | humidity | 60 | 270 | < th | dose independent | rect. | 15 | 2 |
| 541 | 169.95 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 11 | 12 |
| 544 | 169.97 | temperature | 30 | 720 | < th | dose independent | rect. | 19 | 23 |
| 548 | 170.00 | temperature | 25 | 10 | > th | dose dependent | rect. | 22 | 2 |
| 598 | 170.07 | humidity | 60 | 270 | < th | dose independent | rect. | 15 | 5 |
| 613 | 170.08 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 651 | 170.34 | radiation | 40 | 270 | > th | dose independent | rect. | 15 | 1 |
| 669 | 170.34 | radiation | 40 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 701 | 170.45 | atmosphere | 995 | 1440 | < th | dose independent | no | NA | NA |