Os10g0159800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alcohol dehydrogenase superfamily, zinc-containing protein.
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Os10g0159800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alcohol dehydrogenase superfamily, zinc-containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.85 | 0.514 | 9.98 | 0.0487 | 2.57 | -4.35 | -2.85 | 1.92 | 0.193 | 8.24 | 0.6691 | 790 | -- | -- |
| 121.51 | 0.513 | 9.97 | 0.12 | 2.56 | -4.31 | -1.9 | -- | 0.215 | 8.41 | 0.6625 | 802 | -- | -- |
| 120.08 | 0.51 | 9.98 | 0.127 | 2.83 | -4.02 | -- | -4.26 | 0.153 | 10.8 | 0.3996 | 1058 | -- | -- |
| 131.67 | 0.534 | 10 | -0.0304 | 2.78 | -3.97 | -- | -- | 0.115 | 10.7 | 0.76 | 1045 | -- | -- |
| 175.82 | 0.618 | 10 | 0.161 | -- | -3.62 | -- | -4.06 | 0.0388 | -- | 0.5697 | 3216 | -- | -- |
| 175.09 | 0.62 | 10 | 0.486 | 1.57 | -- | -1.45 | -- | 0.388 | 14.4 | -- | -- | -- | -- |
| 182.18 | 0.632 | 10 | 0.449 | 1.58 | -- | -- | -- | 0.38 | 14.7 | -- | -- | -- | -- |
| 141.68 | 0.554 | 10.1 | -0.0617 | -- | -3.08 | -- | -- | 0.0927 | -- | 0.8341 | 1752 | -- | -- |
| 131.63 | 0.534 | 9.99 | -- | 2.84 | -4.1 | -- | -- | 0.105 | 10.7 | 0.76 | 1048 | -- | -- |
| 327.85 | 0.846 | 10 | 0.381 | -- | -- | -- | -- | 0.34 | -- | -- | -- | -- | -- |
| 187.49 | 0.641 | 10 | -- | 1.57 | -- | -- | -- | 0.33 | 14.7 | -- | -- | -- | -- |
| 141.69 | 0.554 | 10.1 | -- | -- | -3.15 | -- | -- | 0.0933 | -- | 0.8662 | 1755 | -- | -- |
| 331.69 | 0.85 | 10 | -- | -- | -- | -- | -- | 0.298 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.04 | radiation | 1 | 720 | < th | dose dependent | sin | 12 | NA |
| 2 | 119.52 | radiation | 1 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 10 | 120.46 | radiation | 1 | 720 | > th | dose independent | sin | 13 | NA |
| 33 | 122.58 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 17 |
| 36 | 122.67 | radiation | 1 | 720 | < th | dose independent | rect. | 15 | 21 |
| 38 | 122.72 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 42 | 122.87 | radiation | 1 | 720 | < th | dose independent | sin | 13 | NA |
| 45 | 122.90 | radiation | 1 | 720 | < th | dose dependent | rect. | 3 | 16 |
| 60 | 123.60 | radiation | 1 | 720 | < th | dose independent | rect. | 15 | 16 |
| 71 | 124.27 | radiation | 1 | 720 | < th | dose dependent | no | NA | NA |
| 76 | 124.48 | radiation | 1 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 83 | 124.68 | radiation | 1 | 270 | < th | dose independent | rect. | 5 | 23 |
| 87 | 124.80 | radiation | 1 | 720 | < th | dose dependent | sin | 1 | NA |
| 92 | 124.93 | radiation | 1 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 93 | 125.00 | radiation | 1 | 720 | < th | dose dependent | rect. | 3 | 18 |
| 98 | 125.17 | radiation | 1 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 105 | 125.35 | radiation | 1 | 720 | > th | dose independent | rect. | 13 | 23 |
| 113 | 125.59 | radiation | 1 | 720 | > th | dose independent | rect. | 14 | 16 |
| 118 | 125.75 | radiation | 1 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 120 | 125.78 | radiation | 1 | 720 | < th | dose independent | rect. | 7 | 23 |
| 122 | 125.86 | radiation | 1 | 720 | > th | dose independent | rect. | 5 | 14 |
| 133 | 125.96 | radiation | 1 | 720 | > th | dose independent | no | NA | NA |
| 188 | 126.15 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 17 |
| 194 | 126.29 | radiation | 1 | 720 | < th | dose independent | no | NA | NA |
| 201 | 126.64 | radiation | 1 | 720 | > th | dose independent | rect. | 11 | 23 |
| 207 | 126.74 | radiation | 1 | 720 | < th | dose independent | rect. | 23 | 23 |
| 209 | 126.76 | radiation | 1 | 720 | > th | dose independent | rect. | 15 | 23 |
| 214 | 126.94 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 23 |
| 227 | 127.27 | radiation | 1 | 720 | < th | dose independent | rect. | 1 | 22 |
| 245 | 127.75 | radiation | 1 | 720 | < th | dose independent | rect. | 3 | 16 |
| 251 | 127.85 | radiation | 1 | 720 | > th | dose independent | rect. | 15 | 19 |
| 257 | 127.96 | radiation | 1 | 720 | < th | dose independent | rect. | 3 | 18 |
| 294 | 128.68 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 5 |
| 383 | 130.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 13 |
| 385 | 130.11 | radiation | 1 | 720 | < th | dose independent | sin | 1 | NA |
| 391 | 130.21 | radiation | 1 | 720 | < th | dose independent | sin | 21 | NA |
| 392 | 130.21 | humidity | 50 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 433 | 131.24 | radiation | 1 | 720 | > th | dose independent | rect. | 13 | 6 |
| 447 | 131.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 453 | 131.47 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 455 | 131.54 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 6 |
| 463 | 131.70 | radiation | 1 | 720 | > th | dose independent | sin | 22 | NA |
| 474 | 131.85 | wind | 3 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 491 | 132.11 | radiation | 1 | 720 | < th | dose independent | rect. | 15 | 6 |
| 508 | 132.27 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 511 | 132.33 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 516 | 132.39 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 520 | 132.42 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 14 |
| 523 | 132.43 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 11 |
| 529 | 132.50 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 14 |
| 531 | 132.52 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 543 | 132.59 | wind | 7 | 43200 | < th | dose independent | rect. | 8 | 9 |
| 552 | 132.61 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 558 | 132.66 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 561 | 132.67 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 13 |
| 562 | 132.68 | wind | 7 | 43200 | > th | dose independent | rect. | 7 | 10 |
| 596 | 132.81 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 17 |
| 599 | 132.82 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 612 | 132.88 | wind | 7 | 43200 | < th | dose independent | sin | 23 | NA |
| 620 | 132.90 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 622 | 132.91 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 17 |
| 627 | 132.94 | wind | 7 | 43200 | > th | dose independent | sin | 23 | NA |
| 640 | 132.97 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 15 |
| 668 | 133.09 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 673 | 133.11 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 675 | 133.12 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 5 |
| 729 | 133.24 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 753 | 133.31 | wind | 7 | 43200 | > th | dose dependent | rect. | 12 | 19 |
| 754 | 133.32 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 15 |
| 763 | 133.34 | radiation | 1 | 720 | > th | dose independent | rect. | 11 | 19 |
| 771 | 133.36 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 21 |
| 775 | 133.37 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 19 |
| 777 | 133.38 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 19 |
| 784 | 133.41 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 17 |
| 793 | 133.43 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 15 |
| 801 | 133.46 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 17 |
| 821 | 133.50 | wind | 5 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 822 | 133.50 | radiation | 1 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 832 | 133.52 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 904 | 133.66 | wind | 5 | 43200 | > th | dose dependent | sin | 20 | NA |
| 917 | 133.69 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 8 |