Os10g0159600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HSP20-like chaperone domain containing protein.
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Os10g0159600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HSP20-like chaperone domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 504.7 | 1.06 | 5.45 | -5.34 | 0.9 | 5.26 | -0.434 | -11.1 | -0.708 | 1.29 | 21.86 | 928 | 13.2 | -- |
| 547.41 | 1.09 | 5.17 | -3.36 | 0.418 | 6.32 | 2.91 | -- | -0.203 | 11.6 | 15.91 | 861 | 12.4 | -- |
| 505.2 | 1.05 | 5.45 | -5.42 | 0.912 | 5.21 | -- | -11.4 | -0.729 | 1.06 | 21.9 | 941 | 13.2 | -- |
| 578.25 | 1.12 | 5.16 | -3.25 | 0.518 | 6.48 | -- | -- | -0.166 | 12.9 | 14.88 | 889 | 12.6 | -- |
| 526.22 | 1.07 | 5.4 | -5.18 | -- | 5.81 | -- | -10.6 | -0.721 | -- | 20.43 | 911 | 12.7 | -- |
| 973.46 | 1.46 | 5.09 | -2.03 | 2.62 | -- | -1.58 | -- | 0.425 | 0.0334 | -- | -- | -- | -- |
| 984.33 | 1.47 | 5.09 | -1.96 | 2.62 | -- | -- | -- | 0.431 | 0.0592 | -- | -- | -- | -- |
| 579.96 | 1.12 | 5.18 | -3.25 | -- | 5.86 | -- | -- | -0.184 | -- | 16.36 | 919 | 12.9 | -- |
| 813.61 | 1.33 | 5.13 | -- | 0.567 | 4.4 | -- | -- | 0.109 | 1.35 | 20.6 | 760 | 11 | -- |
| 1417.2 | 1.76 | 5.03 | -1.88 | -- | -- | -- | -- | 0.469 | -- | -- | -- | -- | -- |
| 1086.1 | 1.54 | 5.04 | -- | 2.6 | -- | -- | -- | 0.65 | 0.0168 | -- | -- | -- | -- |
| 828.57 | 1.34 | 5.08 | -- | -- | 5.03 | -- | -- | 0.254 | -- | 16.27 | 794 | 11.7 | -- |
| 1510.67 | 1.81 | 4.98 | -- | -- | -- | -- | -- | 0.678 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 539.35 | temperature | 20 | 720 | > th | dose dependent | sin | 17 | NA |
| 4 | 548.97 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 7 |
| 6 | 551.31 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 9 | 551.84 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 12 | 552.10 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 9 |
| 13 | 552.34 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 9 |
| 15 | 552.60 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 11 |
| 16 | 552.67 | wind | 3 | 43200 | > th | dose dependent | rect. | 9 | 7 |
| 22 | 553.15 | temperature | 20 | 720 | > th | dose dependent | rect. | 10 | 18 |
| 32 | 553.68 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 37 | 553.93 | wind | 5 | 43200 | > th | dose independent | sin | 23 | NA |
| 43 | 554.18 | wind | 5 | 43200 | > th | dose dependent | sin | 23 | NA |
| 56 | 554.78 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 13 |
| 64 | 555.01 | wind | 5 | 43200 | < th | dose independent | sin | 23 | NA |
| 90 | 556.17 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 92 | 556.19 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 14 |
| 94 | 556.29 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 16 |
| 98 | 556.36 | wind | 5 | 43200 | > th | dose independent | rect. | 7 | 14 |
| 113 | 557.16 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 117 | 557.26 | temperature | 30 | 720 | < th | dose dependent | sin | 18 | NA |
| 124 | 557.39 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 14 |
| 135 | 557.74 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 16 |
| 179 | 558.88 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 20 |
| 185 | 559.00 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 218 | 559.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 8 |
| 234 | 560.15 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 260 | 560.69 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 297 | 561.46 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 16 |
| 369 | 562.86 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 6 |
| 370 | 562.96 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 15 |
| 389 | 563.49 | wind | 7 | 43200 | < th | dose independent | rect. | 23 | 18 |
| 426 | 564.27 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 21 |
| 443 | 564.54 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 457 | 564.83 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 12 |
| 542 | 566.44 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 793 | 570.44 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 794 | 570.45 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 799 | 570.53 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 21 |
| 806 | 570.66 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 21 |
| 826 | 570.99 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 886 | 572.02 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |
| 899 | 572.26 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 15 |
| 933 | 572.75 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 943 | 572.94 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 966 | 573.28 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 994 | 573.60 | wind | 5 | 43200 | > th | dose independent | no | NA | NA |