Os10g0159000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0159000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 324.93 | 0.847 | 3.08 | 0.242 | 0.106 | -0.333 | -1.17 | -4.39 | -0.268 | 18.4 | 19.71 | 646 | -- | -- |
| 330.48 | 0.847 | 3.13 | 0.0715 | 0.14 | 2.11 | -1 | -- | -0.31 | 17.2 | 18.1 | 77 | -- | -- |
| 328.17 | 0.844 | 3.09 | 0.233 | 0.102 | -0.305 | -- | -4.18 | -0.278 | 18.4 | 19.5 | 677 | -- | -- |
| 332.81 | 0.85 | 3.13 | 0.0975 | 0.0878 | 1.9 | -- | -- | -0.312 | 16.7 | 18.08 | 44 | -- | -- |
| 328.71 | 0.844 | 3.08 | 0.229 | -- | -0.33 | -- | -4.22 | -0.281 | -- | 19.5 | 677 | -- | -- |
| 343.16 | 0.868 | 3.14 | -0.0823 | 0.0895 | -- | -1.06 | -- | -0.364 | 16.7 | -- | -- | -- | -- |
| 346.02 | 0.871 | 3.15 | -0.0889 | 0.0935 | -- | -- | -- | -0.37 | 18.3 | -- | -- | -- | -- |
| 333.23 | 0.85 | 3.13 | 0.0917 | -- | 1.89 | -- | -- | -0.322 | -- | 18.08 | 44 | -- | -- |
| 332.97 | 0.85 | 3.14 | -- | 0.0929 | 1.83 | -- | -- | -0.332 | 17.8 | 18.02 | 44 | -- | -- |
| 346.47 | 0.87 | 3.15 | -0.0914 | -- | -- | -- | -- | -0.372 | -- | -- | -- | -- | -- |
| 346.22 | 0.87 | 3.14 | -- | 0.0947 | -- | -- | -- | -0.36 | 18.2 | -- | -- | -- | -- |
| 333.42 | 0.85 | 3.14 | -- | -- | 1.83 | -- | -- | -0.334 | -- | 18.02 | 44 | -- | -- |
| 346.69 | 0.869 | 3.14 | -- | -- | -- | -- | -- | -0.361 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 308.40 | wind | 1.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 3 | 313.54 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 6 | 315.66 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 1 |
| 8 | 315.66 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 15 | 320.12 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 8 | 13 |
| 17 | 320.36 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 19 | 320.52 | humidity | 90.0 | 1440 | > th | dose independent | sin | 22 | NA |
| 24 | 320.85 | humidity | 90.0 | 1440 | < th | dose independent | sin | 23 | NA |
| 30 | 321.12 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 4 | 3 |
| 31 | 321.13 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 14 |
| 35 | 321.23 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 5 | 16 |
| 40 | 321.35 | wind | 1.0 | 90 | < th | dose independent | rect. | 6 | 4 |
| 57 | 321.89 | wind | 1.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 87 | 322.55 | humidity | 90.0 | 1440 | > th | dose dependent | sin | 22 | NA |
| 102 | 322.93 | wind | 1.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 133 | 323.52 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 24 | 9 |
| 136 | 323.58 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 10 | 19 |
| 155 | 323.86 | temperature | 15.0 | 270 | > th | dose independent | rect. | 22 | 10 |
| 169 | 324.05 | temperature | 20.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 173 | 324.10 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 17 | 11 |
| 175 | 324.11 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 18 | 9 |
| 177 | 324.14 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 14 | 15 |
| 182 | 324.17 | wind | 5.0 | 90 | < th | dose dependent | rect. | 24 | 10 |
| 188 | 324.20 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 202 | 324.36 | wind | 1.0 | 90 | < th | dose independent | rect. | 6 | 7 |
| 212 | 324.42 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 6 | 12 |
| 251 | 324.87 | wind | 9.0 | 1440 | < th | dose independent | rect. | 2 | 8 |
| 257 | 324.94 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 1 | 7 |
| 264 | 325.00 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 5 | 22 |
| 267 | 325.02 | wind | 1.0 | 90 | < th | dose dependent | rect. | 6 | 4 |
| 269 | 325.03 | wind | 9.0 | 1440 | < th | dose independent | rect. | 8 | 2 |
| 288 | 325.11 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 2 | 22 |
| 295 | 325.17 | wind | 3.0 | 90 | < th | dose independent | rect. | 24 | 10 |
| 299 | 325.20 | temperature | 15.0 | 720 | > th | dose independent | rect. | 5 | 13 |
| 321 | 325.35 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 326 | 325.37 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 13 | 7 |
| 328 | 325.38 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 23 |
| 332 | 325.40 | temperature | 20.0 | 720 | < th | dose dependent | no | NA | NA |
| 340 | 325.45 | wind | 5.0 | 10 | < th | dose dependent | rect. | 24 | 10 |
| 341 | 325.46 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 343 | 325.46 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 344 | 325.46 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 358 | 325.52 | temperature | 20.0 | 1440 | < th | dose dependent | sin | 23 | NA |
| 369 | 325.59 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 386 | 325.66 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 394 | 325.71 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 409 | 325.79 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 412 | 325.81 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 415 | 325.81 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 431 | 325.87 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 8 | 14 |
| 449 | 325.95 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 467 | 326.06 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 8 | 12 |
| 490 | 326.18 | wind | 3.0 | 10 | < th | dose independent | rect. | 1 | 9 |
| 561 | 326.47 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 562 | 326.47 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 566 | 326.47 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 571 | 326.49 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 24 | 2 |
| 585 | 326.55 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 3 | 17 |
| 608 | 326.66 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 22 |
| 618 | 326.72 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 638 | 326.79 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 659 | 326.87 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 19 | 2 |
| 672 | 326.91 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 698 | 327.00 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 22 | 10 |
| 738 | 327.13 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 9 | 15 |
| 741 | 327.14 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 7 | 22 |
| 760 | 327.19 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 761 | 327.19 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 3 | 3 |
| 763 | 327.19 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 21 | 15 |
| 787 | 327.23 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 829 | 327.32 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 11 |
| 851 | 327.37 | humidity | 90.0 | 1440 | < th | dose independent | no | NA | NA |
| 869 | 327.41 | temperature | 15.0 | 720 | > th | dose independent | rect. | 6 | 19 |
| 871 | 327.42 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 890 | 327.46 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 910 | 327.50 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 4 |
| 916 | 327.51 | temperature | 15.0 | 720 | > th | dose independent | rect. | 14 | 19 |
| 926 | 327.52 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 939 | 327.55 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 941 | 327.55 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 8 | 5 |
| 977 | 327.63 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 989 | 327.65 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 10 | 15 |