Os10g0157400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os10g0157400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 263.11 | 0.762 | 4.22 | 1.28 | 0.906 | -1.19 | -0.353 | -0.722 | 0.0905 | 16.4 | 998.3 | 8380 | -- | -- |
| 263.44 | 0.756 | 4.22 | 1.29 | 0.906 | -1.25 | -0.366 | -- | 0.0809 | 16.4 | 998.5 | 8432 | -- | -- |
| 263.43 | 0.756 | 4.23 | 1.28 | 0.903 | -1.21 | -- | -0.737 | 0.09 | 16.4 | 998.3 | 8430 | -- | -- |
| 263.77 | 0.756 | 4.22 | 1.29 | 0.905 | -1.27 | -- | -- | 0.0849 | 16.4 | 998.5 | 8458 | -- | -- |
| 307.19 | 0.816 | 4.22 | 1.23 | -- | -1.15 | -- | -0.752 | 0.0654 | -- | 998.3 | 8368 | -- | -- |
| 288.11 | 0.796 | 4.2 | 1.19 | 0.892 | -- | -0.371 | -- | 0.173 | 16.5 | -- | -- | -- | -- |
| 288.49 | 0.795 | 4.2 | 1.18 | 0.89 | -- | -- | -- | 0.171 | 16.5 | -- | -- | -- | -- |
| 307.58 | 0.817 | 4.22 | 1.26 | -- | -1.21 | -- | -- | 0.0638 | -- | 998.5 | 8390 | -- | -- |
| 306.32 | 0.815 | 4.25 | -- | 0.877 | -1.26 | -- | -- | -0.0322 | 16.4 | 997 | 8393 | -- | -- |
| 330.87 | 0.85 | 4.2 | 1.15 | -- | -- | -- | -- | 0.147 | -- | -- | -- | -- | -- |
| 325.37 | 0.844 | 4.23 | -- | 0.868 | -- | -- | -- | 0.0392 | 16.5 | -- | -- | -- | -- |
| 347.46 | 0.868 | 4.24 | -- | -- | -1.26 | -- | -- | -0.0464 | -- | 996.9 | 8370 | -- | -- |
| 365.66 | 0.893 | 4.23 | -- | -- | -- | -- | -- | 0.0201 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 258.96 | wind | 3 | 14400 | > th | dose dependent | rect. | 13 | 17 |
| 12 | 259.60 | wind | 5 | 14400 | > th | dose dependent | rect. | 14 | 6 |
| 15 | 259.82 | wind | 5 | 14400 | < th | dose independent | rect. | 13 | 18 |
| 20 | 259.92 | wind | 7 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 29 | 260.10 | wind | 7 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 33 | 260.17 | wind | 5 | 14400 | > th | dose independent | rect. | 13 | 18 |
| 62 | 260.51 | wind | 5 | 14400 | > th | dose dependent | rect. | 13 | 11 |
| 90 | 260.68 | wind | 5 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 107 | 260.84 | wind | 3 | 14400 | > th | dose dependent | sin | 15 | NA |
| 134 | 261.11 | temperature | 30 | 43200 | < th | dose independent | rect. | 24 | 9 |
| 152 | 261.23 | wind | 7 | 14400 | > th | dose independent | rect. | 13 | 12 |
| 177 | 261.33 | wind | 7 | 14400 | < th | dose independent | rect. | 13 | 12 |
| 201 | 261.42 | temperature | 30 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 205 | 261.44 | temperature | 30 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 253 | 261.63 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 310 | 261.76 | wind | 7 | 14400 | > th | dose independent | sin | 18 | NA |
| 327 | 261.86 | wind | 7 | 14400 | < th | dose independent | sin | 18 | NA |
| 452 | 262.28 | wind | 3 | 14400 | > th | dose dependent | rect. | 2 | 20 |
| 470 | 262.33 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 608 | 262.71 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 643 | 262.81 | humidity | 60 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 649 | 262.83 | humidity | 80 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 674 | 262.89 | wind | 7 | 14400 | > th | dose independent | rect. | 4 | 17 |
| 677 | 262.90 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 698 | 262.96 | wind | 3 | 14400 | > th | dose dependent | no | NA | NA |
| 713 | 262.99 | humidity | 70 | 43200 | > th | dose independent | rect. | 22 | 14 |
| 726 | 263.01 | wind | 7 | 14400 | < th | dose independent | rect. | 4 | 17 |
| 744 | 263.04 | humidity | 70 | 43200 | < th | dose independent | rect. | 21 | 16 |
| 745 | 263.04 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 18 |
| 770 | 263.09 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 14 |
| 841 | 263.17 | humidity | 60 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 844 | 263.17 | wind | 9 | 14400 | < th | dose dependent | rect. | 13 | 16 |
| 860 | 263.20 | wind | 3 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 955 | 263.33 | humidity | 60 | 43200 | < th | dose independent | rect. | 12 | 1 |