Os10g0157000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Saposin-like domain containing protein.
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Os10g0157000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Saposin-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.84 | 0.348 | 2.89 | -0.239 | 0.127 | 0.438 | 0.0725 | -2.82 | -0.0152 | 10 | 30.39 | 15 | -- | -- |
| 55.6 | 0.35 | 2.87 | -0.0513 | 0.131 | 0.166 | 0.0527 | -- | -0.0175 | 10 | 30.77 | 14 | -- | -- |
| 54.86 | 0.345 | 2.89 | -0.231 | 0.127 | 0.433 | -- | -2.75 | -0.0153 | 9.99 | 30.4 | 14 | -- | -- |
| 55.61 | 0.347 | 2.87 | -0.0502 | 0.13 | 0.167 | -- | -- | -0.0172 | 10 | 30.78 | 14 | -- | -- |
| 55.82 | 0.348 | 2.9 | -0.243 | -- | 0.455 | -- | -2.91 | -0.0143 | -- | 30.38 | 12 | -- | -- |
| 56.27 | 0.352 | 2.88 | -0.0369 | 0.138 | -- | 0.061 | -- | -0.0287 | 10.9 | -- | -- | -- | -- |
| 56.29 | 0.351 | 2.88 | -0.0344 | 0.138 | -- | -- | -- | -0.0285 | 10.9 | -- | -- | -- | -- |
| 56.62 | 0.35 | 2.88 | -0.0499 | -- | 0.178 | -- | -- | -0.0158 | -- | 30.78 | 7 | -- | -- |
| 55.68 | 0.349 | 2.87 | -- | 0.131 | 0.162 | -- | -- | -0.0122 | 10.1 | 30.78 | 14 | -- | -- |
| 57.47 | 0.354 | 2.88 | -0.0374 | -- | -- | -- | -- | -0.0295 | -- | -- | -- | -- | -- |
| 56.32 | 0.351 | 2.87 | -- | 0.138 | -- | -- | -- | -0.0247 | 10.9 | -- | -- | -- | -- |
| 56.48 | 0.351 | 2.87 | -- | -- | 0.211 | -- | -- | -0.0106 | -- | 31.3 | 7 | -- | -- |
| 57.51 | 0.354 | 2.88 | -- | -- | -- | -- | -- | -0.0253 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.18 | wind | 3.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 3 | 47.03 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 2 |
| 9 | 48.60 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 26 | 49.36 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 32 | 49.45 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 73 | 51.10 | wind | 1.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 74 | 51.10 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 76 | 51.10 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 78 | 51.14 | wind | 1.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 83 | 51.21 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 85 | 51.25 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 87 | 51.45 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 11 | 1 |
| 111 | 52.22 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 8 | 4 |
| 115 | 52.28 | temperature | 25.0 | 90 | > th | dose independent | rect. | 11 | 1 |
| 118 | 52.44 | radiation | 30.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 119 | 52.44 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 130 | 52.48 | radiation | 10.0 | 90 | < th | dose independent | rect. | 11 | 1 |
| 133 | 52.51 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 149 | 52.53 | temperature | 30.0 | 270 | > th | dose independent | rect. | 8 | 1 |
| 181 | 52.62 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 335 | 53.20 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 11 | 1 |
| 344 | 53.24 | wind | 1.0 | 1440 | < th | dose independent | rect. | 17 | 5 |
| 391 | 53.43 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 446 | 53.57 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 11 | 1 |
| 472 | 53.63 | wind | 9.0 | 10 | < th | dose dependent | rect. | 11 | 2 |
| 483 | 53.66 | humidity | 70.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 485 | 53.66 | wind | 9.0 | 90 | < th | dose dependent | rect. | 11 | 1 |
| 505 | 53.69 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 11 | 1 |
| 512 | 53.73 | wind | 1.0 | 1440 | > th | dose independent | rect. | 17 | 4 |
| 514 | 53.73 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 527 | 53.77 | humidity | 50.0 | 10 | > th | dose independent | rect. | 11 | 2 |
| 528 | 53.77 | radiation | 10.0 | 10 | > th | dose independent | rect. | 11 | 2 |
| 546 | 53.82 | wind | 1.0 | 10 | < th | dose independent | sin | 20 | NA |
| 556 | 53.83 | humidity | 70.0 | 720 | > th | dose independent | rect. | 3 | 6 |
| 570 | 53.86 | humidity | 50.0 | 90 | > th | dose independent | rect. | 11 | 1 |
| 581 | 53.88 | temperature | 15.0 | 90 | > th | dose independent | rect. | 11 | 1 |
| 588 | 53.89 | wind | 1.0 | 90 | > th | dose independent | rect. | 11 | 1 |
| 595 | 53.90 | humidity | 90.0 | 90 | < th | dose independent | rect. | 11 | 1 |
| 609 | 53.92 | radiation | 1.0 | 90 | > th | dose independent | rect. | 11 | 1 |
| 614 | 53.92 | radiation | 40.0 | 30 | < th | dose independent | rect. | 13 | 22 |
| 618 | 53.93 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 11 | 1 |
| 620 | 53.93 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 11 | 1 |
| 625 | 53.93 | temperature | 10.0 | 90 | > th | dose independent | rect. | 12 | 23 |
| 627 | 53.93 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 11 | 1 |
| 653 | 53.97 | radiation | 30.0 | 10 | < th | dose independent | rect. | 11 | 18 |
| 658 | 53.99 | humidity | 90.0 | 10 | < th | dose independent | rect. | 11 | 2 |
| 665 | 53.99 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 6 | 7 |
| 673 | 54.01 | temperature | 10.0 | 10 | > th | dose independent | rect. | 11 | 2 |
| 677 | 54.01 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 11 | 2 |
| 681 | 54.01 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 11 | 2 |
| 684 | 54.01 | temperature | 10.0 | 10 | > th | dose independent | rect. | 13 | 22 |
| 686 | 54.01 | wind | 9.0 | 90 | < th | dose independent | rect. | 12 | 23 |
| 687 | 54.01 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 11 | 2 |
| 690 | 54.02 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 694 | 54.02 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 711 | 54.02 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 717 | 54.03 | wind | 9.0 | 10 | < th | dose independent | rect. | 13 | 22 |
| 759 | 54.05 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 13 | 22 |
| 796 | 54.07 | radiation | 30.0 | 10 | < th | dose independent | rect. | 11 | 16 |
| 798 | 54.07 | wind | 1.0 | 10 | > th | dose independent | rect. | 13 | 22 |
| 803 | 54.08 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 13 | 22 |
| 806 | 54.08 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 13 | 22 |
| 846 | 54.11 | temperature | 30.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 859 | 54.14 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 865 | 54.15 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 4 |
| 878 | 54.18 | wind | 9.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 881 | 54.18 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 903 | 54.22 | wind | 1.0 | 10 | > th | dose independent | sin | 21 | NA |
| 927 | 54.23 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 11 | 16 |
| 987 | 54.28 | humidity | 60.0 | 30 | > th | dose independent | rect. | 3 | 8 |