Os10g0155800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os10g0155800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.07 | 0.544 | 6.38 | 2.03 | 0.522 | -0.669 | 0.559 | 9.67 | -0.00767 | 21.8 | 30 | 1449 | -- | -- |
| 148.68 | 0.572 | 6.63 | 0.164 | 0.551 | 0.36 | 0.651 | -- | -0.187 | 23 | 30 | 1449 | -- | -- |
| 135.26 | 0.542 | 6.37 | 2.05 | 0.52 | -0.668 | -- | 9.65 | -0.00488 | 21.7 | 30.02 | 1429 | -- | -- |
| 140.24 | 0.552 | 6.63 | -0.00758 | 0.445 | 0.538 | -- | -- | -0.134 | 22.4 | 30.4 | 4967 | -- | -- |
| 145.48 | 0.562 | 6.41 | 1.55 | -- | -0.336 | -- | 9.98 | 0.00182 | -- | 30 | 2135 | -- | -- |
| 152.75 | 0.579 | 6.63 | 0.2 | 0.514 | -- | 0.644 | -- | -0.197 | 22.3 | -- | -- | -- | -- |
| 154.42 | 0.582 | 6.63 | 0.175 | 0.511 | -- | -- | -- | -0.199 | 22.3 | -- | -- | -- | -- |
| 152.87 | 0.576 | 6.59 | 0.019 | -- | 0.632 | -- | -- | -0.0706 | -- | 30.6 | 4984 | -- | -- |
| 139.9 | 0.551 | 6.61 | -- | 0.47 | 0.573 | -- | -- | -0.0782 | 22.3 | 30.35 | 4906 | -- | -- |
| 170.33 | 0.61 | 6.62 | 0.183 | -- | -- | -- | -- | -0.197 | -- | -- | -- | -- | -- |
| 155.23 | 0.583 | 6.63 | -- | 0.512 | -- | -- | -- | -0.218 | 22.3 | -- | -- | -- | -- |
| 152.77 | 0.576 | 6.6 | -- | -- | 0.651 | -- | -- | -0.0844 | -- | 30.4 | 4985 | -- | -- |
| 171.21 | 0.611 | 6.62 | -- | -- | -- | -- | -- | -0.218 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.82 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 24 | 8 |
| 3 | 132.14 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 4 | 132.14 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 5 | 132.14 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 8 | 132.32 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 5 |
| 9 | 132.39 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 11 | 132.57 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 12 | 132.57 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 14 | 132.66 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 7 |
| 15 | 132.67 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 18 | 132.73 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 20 | 132.78 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 28 | 132.85 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 29 | 132.85 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 59 | 133.30 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 83 | 133.39 | temperature | 30.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 116 | 133.53 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 117 | 133.53 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 157 | 133.76 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 11 |
| 160 | 133.78 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 165 | 133.79 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 19 |
| 169 | 133.81 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 184 | 133.91 | temperature | 30.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 210 | 134.03 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 213 | 134.04 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 229 | 134.09 | temperature | 30.0 | 1440 | > th | dose independent | no | NA | NA |
| 325 | 134.10 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 347 | 134.17 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 390 | 134.31 | temperature | 30.0 | 720 | < th | dose independent | rect. | 3 | 8 |
| 396 | 134.34 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 22 |
| 398 | 134.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 402 | 134.36 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 405 | 134.37 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 408 | 134.38 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 17 | NA |
| 433 | 134.48 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 7 |
| 443 | 134.50 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 15 | 21 |
| 445 | 134.52 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 469 | 134.57 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 15 | 3 |
| 481 | 134.62 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 483 | 134.63 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 2 |
| 485 | 134.63 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 17 |
| 489 | 134.63 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 10 | NA |
| 490 | 134.63 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 491 | 134.64 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 13 |
| 503 | 134.65 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 539 | 134.68 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 8 | 4 |
| 571 | 134.69 | temperature | 30.0 | 1440 | < th | dose independent | no | NA | NA |
| 616 | 134.75 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 8 | 4 |
| 618 | 134.75 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 8 |
| 624 | 134.76 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 20 | 16 |
| 629 | 134.77 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 23 |
| 645 | 134.82 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 15 | 3 |
| 864 | 135.05 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 1 |