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Os10g0154600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.69 (0.0267) R2 : 0.771
β1 : 1.82 (0.0977) R2dD : 0.182 R2D : 0.136
β2 : 3.01 (0.087) R2dC : 0.954 R2C : 0.401
β3 : 1.88 (0.12) R2dE : 0.2 R2E : -0.34
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.423 (0.058) R2dN8 : 0.0375 R2N8 : -0.0309
σ : 0.498
deviance : 114.32
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_____
C
peak time of C : 17.3
E
wheather : temperature
threshold : 30.73
memory length : 135
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 22.7
open length of G : 6.1

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
110.5 0.494 7.69 1.82 3.01 1.81 1.14 -0.276 0.419 17.3 31.25 114 22.8 6.12
110.49 0.49 7.7 1.81 3.01 1.81 1.23 -- 0.405 17.3 31.41 123 22.8 6.09
112.16 0.493 7.68 1.85 3.01 1.78 -- -0.942 0.434 17.3 31.47 126 22.7 6.22
114.32 0.498 7.69 1.82 3.01 1.88 -- -- 0.423 17.3 30.73 135 22.7 6.1
149.5 0.569 7.73 1.66 -- -2.38 -- -1.69 0.244 -- 118.6 400 0.383 6.55
146.88 0.568 7.73 1.74 2.3 -- 1.05 -- 0.236 18.4 -- -- -- --
149.6 0.573 7.73 1.72 2.3 -- -- -- 0.239 18.4 -- -- -- --
145.81 0.562 7.63 1.73 -- -2.38 -- -- 0.384 -- 305.8 422 23.9 7.04
199.52 0.658 7.72 -- 2.96 1.51 -- -- 0.184 17.3 37.99 127 22.6 6.25
425.7 0.964 7.69 1.66 -- -- -- -- 0.191 -- -- -- -- --
227.68 0.706 7.77 -- 2.28 -- -- -- 0.0477 18.5 -- -- -- --
218.05 0.688 7.72 -- -- -2.42 -- -- 0.174 -- 418.1 496 22.4 8.63
498.57 1.04 7.73 -- -- -- -- -- 0.00641 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 112.21 temperature 30.0 90 < th dose dependent rect. 23 6
4 113.85 radiation 40.0 270 < th dose dependent rect. 3 7
6 114.16 temperature 15.0 270 > th dose dependent rect. 4 3
7 114.22 radiation 20.0 270 < th dose independent rect. 3 6
11 115.07 temperature 10.0 270 > th dose dependent rect. 3 5
13 115.18 radiation 1.0 90 < th dose dependent sin 9 NA
15 115.47 temperature 30.0 10 < th dose dependent rect. 23 7
17 115.61 radiation 1.0 90 < th dose independent sin 10 NA
20 115.76 radiation 1.0 90 > th dose independent sin 9 NA
25 115.93 temperature 10.0 270 > th dose dependent rect. 17 14
35 116.48 temperature 30.0 270 < th dose dependent rect. 23 3
39 116.99 humidity 70.0 270 > th dose independent rect. 3 6
40 117.00 radiation 10.0 270 < th dose independent rect. 4 4
49 117.47 humidity 70.0 90 > th dose independent rect. 5 6
54 117.69 radiation 1.0 90 > th dose independent rect. 4 5
64 117.70 radiation 1.0 90 < th dose dependent rect. 23 17
68 117.82 radiation 1.0 90 < th dose dependent rect. 23 8
70 117.88 radiation 1.0 90 < th dose independent rect. 23 8
82 118.09 radiation 1.0 90 < th dose dependent rect. 23 11
91 118.25 wind 9.0 270 < th dose independent rect. 9 18
94 118.31 wind 9.0 270 < th dose independent rect. 7 21
101 118.49 wind 5.0 270 < th dose independent rect. 4 3
103 118.50 radiation 1.0 90 < th dose independent rect. 23 17
113 118.76 precipitation 0.1 270 < th dose independent rect. 3 5
114 118.76 precipitation 0.1 270 < th dose dependent rect. 3 5
115 118.78 radiation 1.0 90 < th dose independent rect. 23 11
118 118.85 atmosphere 1000.0 270 > th dose independent rect. 21 6
127 118.98 humidity 50.0 270 > th dose dependent rect. 3 6
128 118.99 temperature 15.0 270 > th dose independent rect. 7 10
137 119.17 humidity 50.0 270 > th dose dependent rect. 21 6
150 119.27 humidity 70.0 270 > th dose independent rect. 4 3
153 119.29 wind 9.0 270 < th dose dependent rect. 4 3
155 119.31 wind 7.0 270 < th dose independent rect. 3 5
157 119.33 temperature 30.0 10 < th dose dependent rect. 20 10
162 119.37 temperature 30.0 270 < th dose independent rect. 3 6
164 119.38 precipitation 0.1 270 < th dose independent rect. 4 3
165 119.38 precipitation 0.1 270 < th dose dependent rect. 4 3
183 119.56 radiation 20.0 270 < th dose independent rect. 17 15
192 119.63 temperature 10.0 270 > th dose independent rect. 3 6
195 119.63 atmosphere 995.0 270 > th dose independent rect. 3 6
196 119.63 atmosphere 1015.0 270 < th dose independent rect. 3 6
198 119.63 temperature 10.0 270 > th dose independent rect. 9 18
216 119.72 temperature 10.0 270 > th dose independent rect. 4 3
218 119.72 temperature 30.0 270 < th dose independent rect. 4 3
219 119.72 humidity 50.0 270 > th dose independent rect. 4 3
221 119.72 atmosphere 995.0 270 > th dose independent rect. 4 3
222 119.72 atmosphere 1015.0 270 < th dose independent rect. 4 3
224 119.72 temperature 10.0 270 > th dose independent rect. 7 21
228 119.75 precipitation 0.1 270 < th dose independent rect. 8 19
230 119.75 precipitation 0.1 270 < th dose dependent rect. 8 19
238 119.83 atmosphere 1015.0 270 < th dose independent rect. 3 18
249 119.95 atmosphere 1000.0 30 > th dose independent rect. 23 7
260 120.09 humidity 90.0 10 < th dose independent rect. 5 4
267 120.17 atmosphere 995.0 270 > th dose independent rect. 9 18
278 120.31 temperature 20.0 10 > th dose dependent rect. 5 4
290 120.55 radiation 30.0 30 < th dose independent rect. 6 3
294 120.57 wind 7.0 270 < th dose independent rect. 21 6
295 120.59 wind 9.0 270 < th dose independent rect. 7 10
297 120.60 atmosphere 995.0 270 > th dose dependent rect. 22 5
302 120.68 precipitation 0.1 270 < th dose independent rect. 3 18
303 120.68 precipitation 0.1 270 < th dose dependent rect. 3 18
304 120.70 temperature 10.0 270 > th dose independent rect. 21 6
305 120.70 temperature 30.0 270 < th dose independent rect. 21 6
306 120.70 humidity 50.0 270 > th dose independent rect. 21 6
310 120.70 radiation 1.0 270 < th dose independent rect. 21 6
315 120.70 temperature 10.0 270 > th dose independent rect. 3 18
316 120.70 radiation 1.0 270 < th dose dependent rect. 21 6
326 120.77 temperature 25.0 10 > th dose independent rect. 5 4
332 120.82 precipitation 0.1 270 < th dose independent rect. 7 21
335 120.82 precipitation 0.1 270 < th dose dependent rect. 7 21
339 120.87 wind 9.0 270 < th dose dependent rect. 3 5
347 120.94 precipitation 0.1 270 < th dose independent rect. 21 6
348 120.94 precipitation 0.1 270 < th dose dependent rect. 21 6
353 120.95 atmosphere 995.0 270 > th dose independent rect. 7 21
379 121.17 precipitation 0.1 270 < th dose independent rect. 17 14
381 121.17 precipitation 0.1 270 < th dose dependent rect. 17 14
419 121.42 radiation 20.0 90 < th dose independent rect. 5 18
423 121.47 radiation 40.0 270 < th dose dependent rect. 17 15
425 121.49 temperature 20.0 10 > th dose dependent rect. 20 13
433 121.62 precipitation 0.1 270 < th dose independent rect. 7 10
435 121.62 precipitation 0.1 270 < th dose dependent rect. 7 10
445 121.70 wind 3.0 10 < th dose independent rect. 6 3
457 121.76 atmosphere 1015.0 270 < th dose independent rect. 7 10
458 121.76 temperature 10.0 270 > th dose independent rect. 17 14
467 121.79 wind 7.0 10 < th dose dependent rect. 6 3
469 121.80 wind 9.0 10 < th dose independent rect. 9 21
508 121.89 radiation 40.0 270 < th dose dependent rect. 15 17
514 121.93 radiation 40.0 90 < th dose independent rect. 5 18
546 122.05 humidity 50.0 10 > th dose dependent rect. 23 7
554 122.09 humidity 50.0 270 > th dose dependent rect. 4 3
595 122.24 radiation 40.0 270 < th dose independent rect. 3 18
599 122.25 wind 9.0 270 < th dose independent rect. 17 14
616 122.30 temperature 15.0 4320 > th dose independent rect. 7 3
617 122.31 radiation 40.0 10 < th dose dependent rect. 6 4
627 122.36 temperature 25.0 10 > th dose independent rect. 15 18
656 122.49 wind 9.0 270 < th dose independent rect. 20 8
657 122.49 temperature 25.0 10 > th dose independent rect. 18 15
665 122.52 temperature 25.0 30 < th dose independent rect. 22 8
669 122.53 radiation 40.0 90 < th dose dependent rect. 5 18
671 122.54 humidity 50.0 270 > th dose independent rect. 17 14
672 122.55 radiation 40.0 270 < th dose dependent rect. 3 18
673 122.56 temperature 10.0 270 > th dose independent rect. 20 8
674 122.56 temperature 30.0 270 < th dose independent rect. 20 8
675 122.56 humidity 50.0 270 > th dose independent rect. 20 8
684 122.56 temperature 10.0 270 > th dose independent rect. 4 16
714 122.63 wind 9.0 270 < th dose independent rect. 3 18
759 122.86 precipitation 0.1 10 < th dose independent rect. 6 3
760 122.86 precipitation 0.1 10 < th dose dependent rect. 6 3
771 122.89 temperature 10.0 10 > th dose independent rect. 6 3
773 122.89 temperature 30.0 10 < th dose independent rect. 6 3
774 122.89 humidity 50.0 10 > th dose independent rect. 6 3
776 122.89 atmosphere 995.0 10 > th dose independent rect. 6 3
777 122.89 atmosphere 1015.0 10 < th dose independent rect. 6 3
779 122.89 temperature 10.0 10 > th dose independent rect. 9 21
829 122.97 wind 9.0 270 < th dose dependent rect. 21 6
880 123.06 atmosphere 995.0 270 > th dose independent rect. 7 10
946 123.22 humidity 50.0 14400 > th dose independent rect. 7 2
947 123.22 atmosphere 995.0 270 > th dose dependent rect. 9 18
965 123.26 atmosphere 995.0 1440 > th dose independent rect. 7 3
966 123.26 atmosphere 1015.0 1440 < th dose independent rect. 7 3
967 123.26 wind 9.0 10 < th dose independent rect. 23 7
968 123.26 temperature 10.0 10 > th dose independent rect. 23 7
970 123.26 humidity 50.0 10 > th dose independent rect. 23 7
977 123.26 temperature 10.0 10 > th dose independent rect. 6 17
979 123.26 atmosphere 1015.0 10 < th dose independent rect. 6 17
980 123.26 temperature 10.0 1440 > th dose independent rect. 10 21