Os10g0154500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os10g0154500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 128.04 | 0.532 | 6.76 | 2.12 | 0.486 | 2.97 | -4.67 | 6.36 | 0.147 | 16.6 | 0.8395 | 715 | -- | -- |
| 139.38 | 0.55 | 6.82 | 1.91 | 0.554 | 3.69 | 1.22 | -- | 0.0425 | 2.87 | 1.56 | 631 | -- | -- |
| 143.43 | 0.562 | 6.83 | 2.05 | 2.87 | 0.229 | -- | -1.08 | 0.181 | 17.8 | 0.8395 | 715 | -- | -- |
| 141.48 | 0.554 | 6.8 | 1.94 | 0.463 | 3.65 | -- | -- | 0.0164 | 2.88 | 1.55 | 640 | -- | -- |
| 150.01 | 0.57 | 6.84 | 1.9 | -- | 3.23 | -- | -1.92 | -0.105 | -- | 2.09 | 652 | -- | -- |
| 151.24 | 0.577 | 6.82 | 2.08 | 2.86 | -- | 0.481 | -- | 0.189 | 17.4 | -- | -- | -- | -- |
| 151.8 | 0.577 | 6.82 | 2.08 | 2.86 | -- | -- | -- | 0.191 | 17.4 | -- | -- | -- | -- |
| 140.81 | 0.553 | 6.82 | 1.96 | -- | 3.39 | -- | -- | -0.00696 | -- | 2.02 | 665 | -- | -- |
| 228.41 | 0.704 | 6.85 | -- | 0.475 | 3.74 | -- | -- | -0.178 | 2.84 | 0.6841 | 650 | -- | -- |
| 578.69 | 1.12 | 6.78 | 1.98 | -- | -- | -- | -- | 0.121 | -- | -- | -- | -- | -- |
| 265.63 | 0.762 | 6.87 | -- | 2.83 | -- | -- | -- | -0.0403 | 17.5 | -- | -- | -- | -- |
| 228.19 | 0.704 | 6.85 | -- | -- | 3.51 | -- | -- | -0.166 | -- | 0.69 | 699 | -- | -- |
| 682.32 | 1.22 | 6.83 | -- | -- | -- | -- | -- | -0.0992 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.59 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 3 | 124.11 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 16 | 16 |
| 8 | 126.04 | humidity | 60.0 | 720 | > th | dose independent | rect. | 24 | 14 |
| 9 | 126.34 | humidity | 60.0 | 720 | > th | dose independent | rect. | 1 | 12 |
| 11 | 126.47 | radiation | 20.0 | 720 | < th | dose independent | rect. | 16 | 16 |
| 14 | 126.64 | humidity | 60.0 | 270 | > th | dose independent | rect. | 16 | 13 |
| 16 | 126.69 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 1 | 8 |
| 19 | 127.13 | humidity | 60.0 | 720 | > th | dose independent | rect. | 10 | 3 |
| 21 | 127.27 | radiation | 1.0 | 720 | > th | dose independent | rect. | 12 | 23 |
| 23 | 127.39 | radiation | 1.0 | 720 | < th | dose independent | rect. | 24 | 23 |
| 25 | 127.42 | temperature | 30.0 | 720 | < th | dose independent | rect. | 1 | 11 |
| 28 | 127.48 | radiation | 1.0 | 720 | < th | dose independent | rect. | 1 | 18 |
| 29 | 127.49 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 16 |
| 32 | 127.61 | humidity | 60.0 | 720 | > th | dose independent | rect. | 17 | 20 |
| 33 | 127.66 | radiation | 30.0 | 720 | < th | dose dependent | rect. | 16 | 6 |
| 39 | 127.92 | radiation | 1.0 | 720 | > th | dose independent | rect. | 13 | 20 |
| 44 | 128.04 | radiation | 1.0 | 720 | < th | dose independent | rect. | 1 | 20 |
| 47 | 128.07 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 21 |
| 50 | 128.10 | radiation | 1.0 | 720 | > th | dose independent | rect. | 13 | 18 |
| 62 | 128.26 | temperature | 30.0 | 270 | < th | dose independent | rect. | 10 | 10 |
| 68 | 128.32 | radiation | 20.0 | 720 | < th | dose independent | rect. | 16 | 6 |
| 78 | 128.45 | radiation | 1.0 | 720 | < th | dose dependent | sin | 1 | NA |
| 86 | 128.52 | humidity | 50.0 | 720 | > th | dose independent | rect. | 10 | 18 |
| 87 | 128.52 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 21 |
| 93 | 128.59 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 11 |
| 104 | 128.75 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 23 |
| 111 | 128.83 | radiation | 1.0 | 720 | > th | dose independent | no | NA | NA |
| 113 | 128.83 | radiation | 1.0 | 720 | > th | dose independent | rect. | 4 | 15 |
| 160 | 128.83 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 13 |
| 172 | 128.84 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 3 | 16 |
| 175 | 128.86 | radiation | 1.0 | 720 | < th | dose independent | no | NA | NA |
| 179 | 128.86 | radiation | 1.0 | 720 | < th | dose independent | rect. | 13 | 23 |
| 200 | 128.90 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 207 | 129.02 | humidity | 60.0 | 720 | > th | dose independent | rect. | 9 | 13 |
| 215 | 129.07 | radiation | 1.0 | 720 | > th | dose independent | sin | 1 | NA |
| 224 | 129.18 | humidity | 50.0 | 720 | > th | dose independent | rect. | 16 | 6 |
| 232 | 129.28 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 18 |
| 233 | 129.29 | wind | 5.0 | 720 | < th | dose independent | rect. | 4 | 6 |
| 235 | 129.32 | radiation | 1.0 | 720 | < th | dose independent | sin | 1 | NA |
| 237 | 129.34 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 241 | 129.43 | temperature | 30.0 | 270 | < th | dose independent | rect. | 10 | 20 |
| 248 | 129.50 | radiation | 30.0 | 720 | < th | dose independent | rect. | 1 | 8 |
| 264 | 129.68 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 22 |
| 271 | 129.78 | temperature | 30.0 | 720 | < th | dose independent | rect. | 5 | 11 |
| 276 | 129.81 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 1 | 20 |
| 297 | 129.93 | radiation | 1.0 | 720 | < th | dose independent | rect. | 7 | 23 |
| 301 | 129.95 | wind | 9.0 | 720 | < th | dose dependent | rect. | 5 | 5 |
| 312 | 130.02 | radiation | 1.0 | 720 | < th | dose independent | rect. | 20 | 23 |
| 315 | 130.06 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 318 | 130.07 | temperature | 30.0 | 720 | < th | dose independent | rect. | 4 | 13 |
| 333 | 130.18 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 16 | 22 |
| 336 | 130.20 | radiation | 30.0 | 720 | < th | dose independent | rect. | 1 | 10 |
| 342 | 130.22 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 343 | 130.23 | radiation | 40.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 346 | 130.24 | temperature | 30.0 | 720 | < th | dose independent | rect. | 10 | 2 |
| 349 | 130.24 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 352 | 130.26 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 365 | 130.27 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 18 |
| 366 | 130.28 | radiation | 1.0 | 720 | < th | dose dependent | no | NA | NA |
| 375 | 130.29 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 12 | 23 |
| 403 | 130.35 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 416 | 130.39 | humidity | 50.0 | 720 | > th | dose independent | rect. | 10 | 9 |
| 419 | 130.40 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 13 |
| 452 | 130.53 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 20 |
| 460 | 130.57 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 1 | 10 |
| 474 | 130.67 | radiation | 10.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 475 | 130.67 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 516 | 130.89 | temperature | 10.0 | 720 | > th | dose dependent | sin | 0 | NA |
| 520 | 130.91 | temperature | 30.0 | 720 | < th | dose independent | sin | 2 | NA |
| 526 | 130.93 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 11 |
| 530 | 130.95 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 4 |
| 538 | 130.98 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 8 |
| 539 | 130.98 | radiation | 40.0 | 720 | < th | dose independent | rect. | 1 | 12 |
| 551 | 131.04 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 15 |
| 584 | 131.18 | humidity | 70.0 | 10 | > th | dose independent | rect. | 17 | 15 |
| 585 | 131.18 | radiation | 1.0 | 720 | > th | dose independent | rect. | 8 | 23 |
| 592 | 131.20 | radiation | 1.0 | 720 | > th | dose independent | sin | 13 | NA |
| 604 | 131.28 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 4 |
| 608 | 131.30 | radiation | 1.0 | 720 | < th | dose independent | rect. | 1 | 7 |
| 617 | 131.33 | radiation | 1.0 | 720 | < th | dose independent | sin | 13 | NA |
| 621 | 131.35 | humidity | 60.0 | 720 | > th | dose independent | rect. | 24 | 22 |
| 681 | 131.56 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 11 |
| 702 | 131.64 | radiation | 40.0 | 720 | < th | dose independent | rect. | 17 | 20 |
| 723 | 131.70 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 6 |
| 736 | 131.75 | wind | 9.0 | 720 | < th | dose independent | rect. | 22 | 18 |
| 762 | 131.85 | radiation | 30.0 | 720 | < th | dose independent | sin | 11 | NA |
| 763 | 131.85 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 22 | 18 |
| 765 | 131.85 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 22 | 18 |
| 816 | 132.05 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 12 |
| 888 | 132.21 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 7 | 6 |
| 897 | 132.24 | humidity | 60.0 | 720 | > th | dose independent | sin | 4 | NA |
| 915 | 132.29 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 928 | 132.35 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 22 | 9 |
| 934 | 132.35 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 22 | 9 |
| 936 | 132.36 | radiation | 1.0 | 720 | < th | dose independent | sin | 11 | NA |
| 968 | 132.44 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 979 | 132.47 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 15 |
| 980 | 132.47 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 15 |
| 994 | 132.53 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 12 |
| 999 | 132.53 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |