Os10g0153900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os10g0153900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 105.91 | 0.484 | 6.54 | 3.15 | 1.03 | 1.43 | -0.848 | 5.57 | 0.435 | 16.1 | 14.3 | 655 | -- | -- |
| 125.13 | 0.521 | 6.64 | 2.34 | 0.924 | 1.43 | -0.953 | -- | 0.205 | 14.9 | 22.87 | 679 | -- | -- |
| 106.8 | 0.481 | 6.54 | 3.18 | 1.14 | 1.41 | -- | 5.53 | 0.441 | 16.1 | 12.19 | 779 | -- | -- |
| 118.08 | 0.506 | 6.7 | 1.99 | 1.46 | 1.12 | -- | -- | 0.0958 | 16.6 | 23.14 | 1293 | -- | -- |
| 146.83 | 0.564 | 6.57 | 2.81 | -- | 2.15 | -- | 4.93 | 0.268 | -- | 6.772 | 421 | -- | -- |
| 158.26 | 0.59 | 6.62 | 2.53 | 1.28 | -- | -0.0846 | -- | 0.401 | 17 | -- | -- | -- | -- |
| 158.27 | 0.589 | 6.62 | 2.53 | 1.28 | -- | -- | -- | 0.401 | 17 | -- | -- | -- | -- |
| 149.11 | 0.569 | 6.68 | 2.2 | -- | 1.87 | -- | -- | 0.0868 | -- | 23.1 | 383 | -- | -- |
| 228.85 | 0.705 | 6.73 | -- | 1.37 | 1.51 | -- | -- | -0.0809 | 16.9 | 23.78 | 1408 | -- | -- |
| 244.36 | 0.73 | 6.61 | 2.48 | -- | -- | -- | -- | 0.368 | -- | -- | -- | -- | -- |
| 327.01 | 0.846 | 6.69 | -- | 1.24 | -- | -- | -- | 0.119 | 17.1 | -- | -- | -- | -- |
| 230.39 | 0.707 | 6.83 | -- | -- | 2 | -- | -- | -0.599 | -- | 18.17 | 47520 | -- | -- |
| 407.12 | 0.942 | 6.67 | -- | -- | -- | -- | -- | 0.0922 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 102.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 22 |
| 2 | 102.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 12 | 103.82 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 23 | 104.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 88 | 105.59 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 100 | 105.77 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 108 | 105.86 | temperature | 15 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 119 | 105.96 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 139 | 106.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 6 |
| 167 | 106.20 | temperature | 15 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 176 | 106.28 | temperature | 10 | 1440 | > th | dose dependent | sin | 19 | NA |
| 423 | 107.05 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 561 | 107.42 | temperature | 20 | 1440 | > th | dose dependent | sin | 4 | NA |
| 673 | 107.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 10 |
| 682 | 107.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 22 |
| 689 | 107.74 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 12 |
| 769 | 107.91 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 846 | 108.06 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 7 |
| 911 | 108.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 913 | 108.22 | temperature | 20 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 974 | 108.39 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |