Os10g0151500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EGF domain containing protein.
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Os10g0151500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : EGF domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 223.21 | 0.702 | 3.01 | 0.585 | 0.18 | 1.35 | -0.208 | 2.43 | 0.122 | 1.03 | 19.37 | 5133 | -- | -- |
| 229.82 | 0.706 | 2.91 | 0.92 | 0.194 | 0.905 | -0.316 | -- | 0.265 | 0.381 | 20.07 | 5193 | -- | -- |
| 223.28 | 0.696 | 3.01 | 0.601 | 0.18 | 1.4 | -- | 2.52 | 0.122 | 0.62 | 19.24 | 5119 | -- | -- |
| 229.57 | 0.706 | 2.92 | 0.934 | 0.206 | 0.854 | -- | -- | 0.22 | 0.698 | 19.9 | 5099 | -- | -- |
| 225.21 | 0.699 | 3.01 | 0.601 | -- | 1.41 | -- | 2.57 | 0.122 | -- | 19.2 | 5102 | -- | -- |
| 236.6 | 0.721 | 2.96 | 0.35 | 0.147 | -- | -0.279 | -- | -0.00827 | 1.39 | -- | -- | -- | -- |
| 236.88 | 0.721 | 2.96 | 0.36 | 0.148 | -- | -- | -- | -0.00626 | 0.71 | -- | -- | -- | -- |
| 230.87 | 0.708 | 2.91 | 0.795 | -- | 0.694 | -- | -- | 0.177 | -- | 19.8 | 5096 | -- | -- |
| 238.25 | 0.719 | 2.95 | -- | 0.141 | 0.239 | -- | -- | -0.014 | 0.629 | 28.4 | 4419 | -- | -- |
| 238.25 | 0.721 | 2.96 | 0.365 | -- | -- | -- | -- | -0.00362 | -- | -- | -- | -- | -- |
| 240.29 | 0.725 | 2.97 | -- | 0.154 | -- | -- | -- | -0.0463 | 0.819 | -- | -- | -- | -- |
| 239.82 | 0.721 | 2.96 | -- | -- | 0.234 | -- | -- | -0.0369 | -- | 28.55 | 4450 | -- | -- |
| 241.77 | 0.726 | 2.97 | -- | -- | -- | -- | -- | -0.0441 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 213.47 | wind | 9 | 30 | > th | dose dependent | rect. | 17 | 2 |
| 9 | 213.72 | wind | 9 | 30 | > th | dose independent | rect. | 17 | 1 |
| 137 | 216.52 | wind | 9 | 10 | > th | dose dependent | sin | 12 | NA |
| 195 | 218.68 | temperature | 25 | 30 | > th | dose dependent | rect. | 21 | 1 |
| 240 | 220.57 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 8 | 2 |
| 242 | 220.58 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 8 | 1 |
| 256 | 220.74 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 6 | 5 |
| 257 | 220.75 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 6 | 1 |
| 313 | 221.23 | wind | 9 | 90 | > th | dose independent | sin | 13 | NA |
| 356 | 221.52 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 386 | 221.79 | humidity | 90 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 409 | 222.20 | atmosphere | 1000 | 30 | < th | dose dependent | rect. | 6 | 5 |
| 425 | 222.29 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 482 | 222.49 | wind | 9 | 90 | < th | dose independent | sin | 13 | NA |
| 488 | 222.57 | humidity | 50 | 10 | < th | dose independent | rect. | 11 | 3 |
| 540 | 222.73 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 578 | 223.16 | humidity | 50 | 90 | < th | dose independent | rect. | 11 | 2 |
| 600 | 223.17 | wind | 9 | 10 | < th | dose independent | rect. | 3 | 23 |
| 613 | 223.33 | humidity | 50 | 10 | < th | dose dependent | rect. | 11 | 3 |
| 742 | 223.75 | humidity | 50 | 90 | < th | dose dependent | rect. | 11 | 2 |
| 768 | 223.87 | humidity | 60 | 270 | < th | dose independent | rect. | 18 | 1 |
| 774 | 223.90 | humidity | 60 | 270 | < th | dose dependent | rect. | 18 | 1 |
| 816 | 224.08 | humidity | 90 | 30 | > th | dose independent | rect. | 1 | 2 |
| 825 | 224.12 | wind | 1 | 720 | > th | dose independent | rect. | 14 | 7 |