Os10g0148800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Leucine-rich repeat, cysteine-containing subtype containing protein.
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Os10g0148800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Leucine-rich repeat, cysteine-containing subtype containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.68 | 0.243 | 9.32 | 0.0488 | 0.675 | 0.87 | -0.417 | 0.128 | 0.11 | 16.7 | 20.6 | 1471 | -- | -- |
| 26.05 | 0.238 | 9.34 | -0.0254 | 0.686 | 0.805 | -0.465 | -- | 0.0582 | 16.5 | 21.33 | 2610 | -- | -- |
| 27.1 | 0.242 | 9.33 | 0.0651 | 0.674 | 0.856 | -- | 0.152 | 0.111 | 16.8 | 20.7 | 1472 | -- | -- |
| 26.46 | 0.24 | 9.34 | -0.0261 | 0.69 | 0.788 | -- | -- | 0.056 | 16.6 | 21.34 | 2650 | -- | -- |
| 49.59 | 0.328 | 9.32 | 0.00702 | -- | 0.848 | -- | 0.131 | 0.0835 | -- | 20.7 | 1786 | -- | -- |
| 42.61 | 0.306 | 9.29 | 0.378 | 0.655 | -- | -0.278 | -- | 0.297 | 16.8 | -- | -- | -- | -- |
| 42.8 | 0.306 | 9.29 | 0.377 | 0.655 | -- | -- | -- | 0.296 | 16.9 | -- | -- | -- | -- |
| 49.6 | 0.328 | 9.32 | -0.0171 | -- | 0.839 | -- | -- | 0.0771 | -- | 20.69 | 1788 | -- | -- |
| 26.48 | 0.24 | 9.34 | -- | 0.69 | 0.778 | -- | -- | 0.0615 | 16.7 | 21.34 | 2650 | -- | -- |
| 65.41 | 0.378 | 9.28 | 0.353 | -- | -- | -- | -- | 0.279 | -- | -- | -- | -- | -- |
| 46.54 | 0.319 | 9.3 | -- | 0.648 | -- | -- | -- | 0.254 | 16.9 | -- | -- | -- | -- |
| 49.61 | 0.328 | 9.33 | -- | -- | 0.833 | -- | -- | 0.08 | -- | 20.7 | 1794 | -- | -- |
| 68.68 | 0.387 | 9.29 | -- | -- | -- | -- | -- | 0.24 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.42 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 3 | 25.63 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 8 |
| 4 | 25.64 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 8 |
| 7 | 25.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 12 |
| 49 | 25.80 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 9 |
| 88 | 25.88 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 9 |
| 108 | 25.91 | temperature | 25 | 1440 | < th | dose dependent | sin | 8 | NA |
| 111 | 25.92 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 124 | 25.93 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 131 | 25.94 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 5 |
| 138 | 25.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 139 | 25.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 2 |
| 157 | 25.98 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 201 | 26.03 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 205 | 26.03 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 238 | 26.06 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 239 | 26.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 309 | 26.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 411 | 26.22 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 414 | 26.23 | temperature | 15 | 1440 | > th | dose dependent | sin | 9 | NA |
| 441 | 26.25 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 548 | 26.36 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 556 | 26.37 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 568 | 26.37 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 808 | 26.64 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 886 | 26.71 | temperature | 20 | 30 | > th | dose dependent | rect. | 7 | 17 |
| 929 | 26.74 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 18 |
| 962 | 26.78 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 968 | 26.78 | temperature | 10 | 720 | > th | dose dependent | sin | 4 | NA |