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Os10g0142900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.51 (0.0165) R2 : 0.787
β1 : -1.78 (0.0603) R2dD : 0.422 R2D : 0.293
β2 : 1.18 (0.0428) R2dC : 0.354 R2C : 0.29
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.567 (0.0352) R2dN8 : 0.162 R2N8 : 0.026
σ : 0.31
deviance : 43.77
__
_____
C
peak time of C : 5.07
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
38.44 0.291 9.51 -1.85 1.3 -0.378 -0.523 1.27 -0.643 5.35 87.75 549 -- --
41.29 0.299 9.52 -1.75 1.3 -0.382 -0.0251 -- -0.624 5.41 87.3 598 -- --
38.96 0.291 9.51 -1.84 1.29 -0.384 -- 1.05 -0.641 5.37 87.57 598 -- --
41.27 0.299 9.52 -1.74 1.32 -0.397 -- -- -0.628 5.38 87.3 559 -- --
79.28 0.415 9.51 -1.82 -- 1.02 -- 0.562 -0.376 -- 69.02 358 -- --
43.71 0.31 9.51 -1.78 1.18 -- -0.153 -- -0.568 5.07 -- -- -- --
43.77 0.31 9.51 -1.78 1.18 -- -- -- -0.567 5.07 -- -- -- --
77.56 0.41 9.51 -1.78 -- 0.952 -- -- -0.476 -- 66 333 -- --
119.85 0.51 9.49 -- 1.16 -0.667 -- -- -0.493 5.1 85.05 1487 -- --
116.4 0.504 9.52 -1.74 -- -- -- -- -0.537 -- -- -- -- --
127.43 0.528 9.46 -- 1.15 -- -- -- -0.368 5.13 -- -- -- --
160.75 0.591 9.47 -- -- 0.985 -- -- -0.308 -- 59.64 331 -- --
196.21 0.654 9.48 -- -- -- -- -- -0.344 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 37.95 humidity 90.0 720 > th dose independent rect. 5 21
2 38.03 humidity 90.0 720 > th dose dependent rect. 7 19
11 38.34 humidity 90.0 720 > th dose dependent sin 22 NA
39 38.70 precipitation 0.1 1440 > th dose independent rect. 2 1
40 38.70 precipitation 0.1 1440 > th dose dependent rect. 2 1
45 38.74 temperature 15.0 270 > th dose independent rect. 9 22
49 38.79 humidity 90.0 720 > th dose independent rect. 20 22
53 38.80 humidity 90.0 720 < th dose independent rect. 6 20
57 38.83 temperature 15.0 720 > th dose independent rect. 17 23
58 38.83 humidity 60.0 43200 < th dose dependent rect. 4 4
61 38.83 temperature 20.0 1440 < th dose dependent rect. 7 7
69 38.85 humidity 80.0 1440 > th dose dependent rect. 9 4
75 38.89 temperature 15.0 720 > th dose independent rect. 17 14
80 38.91 temperature 20.0 720 < th dose dependent rect. 6 13
85 38.94 humidity 90.0 1440 < th dose independent rect. 11 2
89 38.95 wind 1.0 1440 > th dose independent rect. 1 1
90 38.95 wind 1.0 1440 > th dose independent rect. 23 4
110 39.00 humidity 90.0 720 < th dose independent rect. 17 23
111 39.01 humidity 90.0 720 < th dose independent rect. 8 18
116 39.03 wind 1.0 1440 < th dose independent rect. 1 1
117 39.03 temperature 15.0 720 > th dose independent rect. 4 18
122 39.05 humidity 90.0 720 > th dose independent rect. 8 23
123 39.06 humidity 90.0 720 > th dose independent no NA NA
129 39.06 precipitation 0.1 720 > th dose dependent rect. 1 17
136 39.08 humidity 90.0 720 > th dose independent rect. 21 5
142 39.09 humidity 60.0 43200 > th dose independent rect. 23 8
144 39.09 temperature 15.0 720 > th dose independent rect. 10 19
158 39.11 humidity 90.0 720 > th dose independent rect. 13 23
163 39.12 humidity 90.0 720 > th dose independent rect. 17 23
177 39.14 humidity 90.0 720 < th dose independent rect. 21 1
188 39.16 humidity 90.0 720 > th dose independent rect. 15 23
196 39.17 humidity 90.0 720 < th dose independent rect. 8 23
200 39.18 humidity 90.0 720 < th dose independent rect. 19 21
202 39.18 precipitation 0.1 720 > th dose dependent sin 1 NA
207 39.19 humidity 90.0 1440 > th dose independent rect. 11 2
209 39.19 temperature 15.0 720 > th dose independent rect. 19 10
214 39.19 humidity 90.0 720 < th dose independent rect. 19 23
222 39.20 humidity 90.0 720 < th dose independent rect. 1 23
227 39.21 temperature 15.0 1440 > th dose independent rect. 17 12
242 39.23 temperature 15.0 1440 > th dose independent rect. 19 12
248 39.23 temperature 20.0 1440 < th dose dependent rect. 8 1
259 39.25 humidity 90.0 720 > th dose independent rect. 24 23
281 39.27 temperature 20.0 1440 < th dose dependent rect. 11 2
283 39.27 precipitation 0.1 720 > th dose dependent rect. 5 13
285 39.28 precipitation 0.1 720 > th dose independent rect. 5 13
300 39.30 wind 1.0 1440 < th dose independent rect. 23 4
301 39.30 wind 1.0 1440 > th dose independent rect. 1 5
304 39.30 temperature 15.0 720 > th dose independent rect. 4 16
306 39.30 precipitation 0.1 720 > th dose independent rect. 1 17
316 39.31 temperature 15.0 720 > th dose independent rect. 8 7
317 39.31 humidity 60.0 43200 < th dose independent rect. 22 9
325 39.31 humidity 90.0 720 > th dose dependent rect. 1 23
326 39.32 wind 1.0 1440 < th dose independent rect. 1 3
327 39.32 temperature 15.0 1440 > th dose independent rect. 21 10
330 39.32 temperature 15.0 1440 > th dose independent rect. 17 18
336 39.32 temperature 20.0 720 < th dose dependent sin 23 NA
349 39.34 humidity 90.0 720 < th dose independent no NA NA
352 39.34 humidity 90.0 720 < th dose independent rect. 10 23
353 39.34 humidity 90.0 720 < th dose independent rect. 21 23
358 39.34 humidity 80.0 720 > th dose dependent rect. 20 23
370 39.36 humidity 50.0 43200 < th dose independent rect. 4 4
372 39.36 temperature 15.0 720 > th dose independent rect. 12 17
378 39.37 temperature 15.0 1440 > th dose independent sin 12 NA
387 39.37 temperature 15.0 90 > th dose independent rect. 17 23
389 39.37 humidity 90.0 720 < th dose independent rect. 23 23
393 39.38 temperature 15.0 720 > th dose independent rect. 17 16
394 39.38 temperature 15.0 1440 > th dose independent rect. 19 16
404 39.39 temperature 15.0 4320 > th dose independent rect. 7 1
416 39.39 humidity 90.0 720 < th dose independent rect. 15 23
417 39.39 humidity 90.0 720 > th dose dependent no NA NA
421 39.40 humidity 90.0 720 > th dose independent sin 23 NA
443 39.41 humidity 90.0 720 > th dose dependent rect. 13 23
454 39.42 humidity 80.0 720 > th dose dependent rect. 16 23
458 39.43 temperature 15.0 1440 > th dose independent rect. 21 8
490 39.44 temperature 20.0 4320 < th dose dependent rect. 14 5
491 39.44 temperature 20.0 4320 < th dose dependent rect. 12 7
518 39.46 radiation 1.0 1440 < th dose independent rect. 9 2
520 39.46 temperature 15.0 1440 > th dose independent rect. 21 14
523 39.46 radiation 1.0 1440 < th dose dependent rect. 9 2
548 39.48 humidity 50.0 43200 > th dose independent rect. 2 6
559 39.48 temperature 20.0 720 < th dose dependent rect. 5 21
598 39.51 precipitation 0.1 720 > th dose independent sin 0 NA
610 39.51 temperature 20.0 90 < th dose dependent rect. 20 16
618 39.51 temperature 20.0 90 < th dose dependent rect. 20 21
634 39.52 humidity 90.0 720 < th dose independent rect. 12 23
638 39.52 humidity 50.0 43200 < th dose dependent rect. 19 15
671 39.54 radiation 1.0 1440 > th dose independent rect. 9 3
683 39.54 temperature 15.0 1440 > th dose independent rect. 12 23
698 39.55 precipitation 0.1 720 < th dose independent sin 1 NA
699 39.55 humidity 90.0 1440 < th dose independent rect. 9 4
707 39.55 temperature 15.0 1440 > th dose independent rect. 19 23
708 39.55 precipitation 0.1 720 < th dose dependent sin 1 NA
716 39.56 wind 1.0 1440 < th dose independent rect. 19 9
724 39.56 temperature 15.0 720 > th dose independent rect. 23 23
727 39.56 temperature 25.0 10 > th dose dependent rect. 16 8
729 39.56 humidity 90.0 720 > th dose dependent rect. 7 10
745 39.57 temperature 15.0 1440 > th dose independent rect. 23 8
746 39.57 wind 1.0 1440 < th dose independent rect. 22 9
784 39.58 temperature 15.0 1440 > th dose independent rect. 21 23
791 39.58 humidity 50.0 270 > th dose dependent rect. 20 15
803 39.59 precipitation 0.1 1440 < th dose independent rect. 2 1
804 39.59 humidity 60.0 43200 > th dose independent rect. 24 3
825 39.59 temperature 15.0 720 > th dose independent rect. 6 23
826 39.59 temperature 15.0 1440 > th dose independent rect. 14 23
828 39.59 temperature 20.0 4320 < th dose dependent rect. 17 1
829 39.59 precipitation 0.1 1440 < th dose dependent rect. 2 1
843 39.60 humidity 50.0 43200 > th dose independent rect. 4 4
853 39.60 temperature 15.0 1440 > th dose independent rect. 21 21
869 39.60 temperature 20.0 90 < th dose dependent rect. 8 22
875 39.61 humidity 90.0 720 > th dose independent rect. 5 13
954 39.63 temperature 25.0 10 > th dose dependent rect. 16 12
976 39.63 temperature 20.0 90 < th dose dependent rect. 1 23