Os10g0140700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0140700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 178.67 | 0.628 | 12.3 | 0.797 | 1.2 | 1.79 | 0.57 | 1.37 | -0.162 | 9.43 | 22.2 | 1799 | -- | -- |
| 183.15 | 0.63 | 12.3 | 1.17 | 1.21 | 1.69 | 0.643 | -- | -0.0476 | 9.39 | 22.47 | 1774 | -- | -- |
| 179.67 | 0.624 | 12.3 | 0.81 | 1.22 | 1.82 | -- | 1.46 | -0.174 | 9.42 | 22.06 | 1725 | -- | -- |
| 184.45 | 0.633 | 12.3 | 1.26 | 1.2 | 1.76 | -- | -- | -0.0604 | 9.41 | 22.2 | 1801 | -- | -- |
| 253.09 | 0.741 | 12.3 | 0.901 | -- | 1.94 | -- | 1.36 | -0.0897 | -- | 22.1 | 2145 | -- | -- |
| 296.09 | 0.807 | 12.4 | 0.538 | 1.24 | -- | 0.545 | -- | -0.649 | 9.4 | -- | -- | -- | -- |
| 297.17 | 0.807 | 12.4 | 0.558 | 1.23 | -- | -- | -- | -0.648 | 9.41 | -- | -- | -- | -- |
| 243.78 | 0.727 | 12.3 | 1.22 | -- | 1.72 | -- | -- | -0.0752 | -- | 22.4 | 803 | -- | -- |
| 217.83 | 0.687 | 12.3 | -- | 1.24 | 1.45 | -- | -- | -0.27 | 9.13 | 22.5 | 1410 | -- | -- |
| 386.29 | 0.918 | 12.4 | 0.551 | -- | -- | -- | -- | -0.644 | -- | -- | -- | -- | -- |
| 305.39 | 0.817 | 12.4 | -- | 1.23 | -- | -- | -- | -0.711 | 9.38 | -- | -- | -- | -- |
| 273.54 | 0.77 | 12.3 | -- | -- | 1.54 | -- | -- | -0.232 | -- | 22.32 | 788 | -- | -- |
| 394.3 | 0.927 | 12.4 | -- | -- | -- | -- | -- | -0.705 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 183.95 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 2 | 184.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 9 | 184.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 14 | 16 |
| 43 | 186.14 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 57 | 186.62 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 253 | 190.10 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 274 | 190.39 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 374 | 191.90 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 375 | 191.92 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 385 | 192.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 387 | 192.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 404 | 192.16 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 461 | 192.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 584 | 194.14 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 705 | 195.39 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |