Os10g0138100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aldehyde oxidase-2.
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Os10g0138100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Aldehyde oxidase-2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 535.23 | 1.09 | 9.15 | 2.88 | 2.17 | 2.59 | -1.65 | -3.17 | -5.25 | 3.99 | 24.7 | 1372 | 10.1 | -- |
| 550.23 | 1.09 | 9.29 | 2.04 | 2.08 | 2.75 | -1.69 | -- | -5.54 | 3.64 | 24.8 | 1195 | 10.5 | -- |
| 541.2 | 1.08 | 9.14 | 2.78 | 2.1 | 2.63 | -- | -2.89 | -5.29 | 3.93 | 24.77 | 1288 | 10.9 | -- |
| 552.09 | 1.09 | 9.26 | 1.87 | 1.95 | 2.58 | -- | -- | -5.56 | 3.85 | 24.65 | 1194 | 11.2 | -- |
| 669.19 | 1.2 | 9.17 | 2.69 | -- | 3.22 | -- | -2.86 | -5.4 | -- | 24.8 | 2035 | 8.89 | -- |
| 743.94 | 1.28 | 9.46 | 1.1 | 1.94 | -- | -1.47 | -- | -6.46 | 4.35 | -- | -- | -- | -- |
| 749.72 | 1.28 | 9.45 | 1.12 | 1.93 | -- | -- | -- | -6.45 | 4.44 | -- | -- | -- | -- |
| 675.08 | 1.21 | 9.26 | 1.89 | -- | 2.88 | -- | -- | -5.88 | -- | 24.5 | 839 | 11.6 | -- |
| 634.21 | 1.17 | 9.29 | -- | 1.84 | 2.33 | -- | -- | -5.84 | 3.86 | 24.5 | 1057 | 10.7 | -- |
| 949.87 | 1.44 | 9.47 | 1.19 | -- | -- | -- | -- | -6.4 | -- | -- | -- | -- | -- |
| 782.56 | 1.31 | 9.48 | -- | 1.95 | -- | -- | -- | -6.58 | 4.43 | -- | -- | -- | -- |
| 708.41 | 1.24 | 9.35 | -- | -- | 2.82 | -- | -- | -5.9 | -- | 24.69 | 568 | 7.83 | -- |
| 987.35 | 1.47 | 9.5 | -- | -- | -- | -- | -- | -6.53 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 538.81 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 17 |
| 5 | 540.78 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 16 |
| 8 | 541.07 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 11 |
| 10 | 541.11 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 15 | 542.18 | temperature | 20 | 270 | > th | dose dependent | sin | 10 | NA |
| 24 | 543.11 | temperature | 25 | 1440 | < th | dose independent | sin | 16 | NA |
| 25 | 543.12 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 10 |
| 62 | 547.06 | temperature | 25 | 1440 | > th | dose independent | sin | 17 | NA |
| 79 | 548.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 84 | 548.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 113 | 550.77 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 123 | 551.43 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 22 |
| 125 | 551.76 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 143 | 552.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 148 | 552.67 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 164 | 553.20 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 167 | 553.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 183 | 553.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 3 |
| 206 | 554.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 262 | 555.68 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 270 | 555.74 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 277 | 555.93 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 286 | 556.08 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 465 | 559.06 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 476 | 559.16 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 486 | 559.36 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 501 | 559.60 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 514 | 559.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 560 | 560.32 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 585 | 560.44 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 23 |
| 620 | 560.67 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 638 | 560.84 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 660 | 561.01 | temperature | 25 | 1440 | < th | dose independent | no | NA | NA |
| 690 | 561.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 767 | 561.69 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 771 | 561.70 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 806 | 561.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 808 | 561.94 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 838 | 562.21 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 869 | 562.37 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 874 | 562.39 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 908 | 562.69 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 911 | 562.70 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 925 | 562.79 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 933 | 562.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |