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Os10g0137100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.33 (0.0351) R2 : 0.475
β1 : 1.47 (0.129) R2dD : 0.156 R2D : 0.159
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.07 (0.0749) R2dN8 : 0.316 R2N8 : 0.319
σ : 0.659
deviance : 198.8
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
169.27 0.611 6.33 1.59 0.521 -0.53 0.643 1.21 -1.05 16.1 1010 10 -- --
173.98 0.619 6.34 1.51 0.513 -0.57 0.628 -- -1.06 16.2 1010 10 -- --
170.34 0.613 6.33 1.6 0.523 -0.53 -- 1.19 -1.05 15.8 1010 10 -- --
174.91 0.62 6.33 1.51 0.515 -0.567 -- -- -1.06 15.8 1010 9 -- --
185.4 0.638 6.33 1.57 -- -0.516 -- 1.13 -1.06 -- 1010 10 -- --
183.72 0.635 6.34 1.48 0.502 -- 0.573 -- -1.06 15.8 -- -- -- --
184.52 0.636 6.33 1.49 0.503 -- -- -- -1.06 15.3 -- -- -- --
189.51 0.644 6.33 1.49 -- -0.551 -- -- -1.07 -- 1010 9 -- --
235.08 0.718 6.37 -- 0.484 -0.51 -- -- -1.23 15.8 1010 9 -- --
198.8 0.659 6.33 1.47 -- -- -- -- -1.07 -- -- -- -- --
242.86 0.729 6.37 -- 0.474 -- -- -- -1.22 15.4 -- -- -- --
248 0.736 6.37 -- -- -0.496 -- -- -1.24 -- 1010 9 -- --
255.53 0.746 6.37 -- -- -- -- -- -1.23 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 165.29 radiation 40 10 < th dose independent rect. 7 23
2 166.06 temperature 15 14400 > th dose independent rect. 7 1
3 166.26 atmosphere 1010 10 < th dose independent rect. 2 22
4 166.28 temperature 10 720 > th dose dependent rect. 7 6
8 166.91 atmosphere 1010 10 < th dose independent rect. 2 6
9 167.05 atmosphere 1005 720 > th dose dependent rect. 19 12
13 167.40 temperature 10 270 > th dose dependent rect. 7 13
14 167.46 atmosphere 1010 10 < th dose independent sin 7 NA
16 167.57 atmosphere 1010 10 < th dose independent rect. 7 23
23 168.11 atmosphere 1010 10 < th dose independent rect. 14 18
32 168.38 wind 7 1440 < th dose independent rect. 7 1
37 168.46 humidity 90 4320 > th dose dependent rect. 2 1
42 168.60 atmosphere 1005 720 > th dose dependent sin 11 NA
44 168.65 temperature 15 270 > th dose dependent rect. 9 11
49 168.75 atmosphere 1010 10 < th dose independent rect. 10 23
61 168.88 humidity 60 43200 < th dose dependent rect. 6 1
68 169.00 temperature 15 720 > th dose dependent rect. 8 3
71 169.05 atmosphere 1015 720 < th dose independent rect. 2 17
83 169.17 humidity 60 43200 < th dose independent rect. 4 3
84 169.18 atmosphere 1010 10 < th dose independent rect. 12 20
91 169.25 temperature 15 720 > th dose independent rect. 19 16
92 169.27 humidity 60 43200 < th dose independent rect. 2 5
93 169.30 atmosphere 1010 10 < th dose independent no NA NA
103 169.37 atmosphere 1010 10 < th dose independent rect. 12 23
110 169.40 atmosphere 995 90 > th dose dependent rect. 5 21
112 169.41 atmosphere 1015 720 < th dose independent rect. 7 23
114 169.44 atmosphere 1010 10 < th dose independent rect. 2 17
119 169.46 atmosphere 1005 10 > th dose dependent rect. 6 8
121 169.49 temperature 30 720 < th dose dependent rect. 5 10
128 169.56 temperature 10 270 > th dose dependent sin 21 NA
134 169.60 temperature 30 270 < th dose dependent rect. 8 9
137 169.62 atmosphere 1005 720 > th dose dependent rect. 6 1
148 169.70 atmosphere 1005 10 > th dose dependent rect. 6 10
149 169.71 temperature 15 720 > th dose independent rect. 23 8
150 169.72 wind 9 14400 > th dose dependent rect. 19 1
157 169.77 atmosphere 1005 720 > th dose dependent rect. 4 3
181 169.95 atmosphere 1015 720 < th dose independent rect. 16 16
183 169.95 wind 1 14400 < th dose dependent rect. 6 2
192 170.00 temperature 15 720 > th dose independent rect. 7 7
196 170.02 atmosphere 1015 720 < th dose independent rect. 20 8
206 170.08 humidity 60 43200 > th dose independent rect. 1 1
207 170.08 temperature 20 4320 < th dose dependent rect. 16 1
209 170.11 atmosphere 1005 720 > th dose dependent rect. 24 1
224 170.20 atmosphere 1010 10 < th dose independent rect. 2 15
231 170.23 humidity 50 43200 < th dose independent rect. 6 1
232 170.23 temperature 30 270 < th dose dependent sin 23 NA
239 170.25 atmosphere 995 10 > th dose dependent rect. 6 20
257 170.34 humidity 60 43200 < th dose dependent rect. 2 5
281 170.42 atmosphere 1005 10 > th dose dependent rect. 6 12
291 170.46 temperature 25 270 > th dose independent rect. 12 8
298 170.48 wind 3 10 < th dose dependent rect. 6 1
321 170.60 temperature 15 90 > th dose dependent rect. 13 10
325 170.62 temperature 10 30 > th dose dependent sin 19 NA
332 170.64 humidity 80 30 > th dose dependent rect. 6 1
335 170.66 atmosphere 1010 1440 > th dose dependent rect. 16 6
344 170.69 atmosphere 995 720 > th dose dependent rect. 4 10
346 170.69 atmosphere 995 720 > th dose dependent rect. 19 21
347 170.70 humidity 60 43200 > th dose independent rect. 1 6
351 170.72 atmosphere 1005 30 > th dose dependent rect. 6 1
352 170.72 temperature 30 720 < th dose dependent rect. 7 4
362 170.75 atmosphere 1010 10 < th dose independent rect. 2 9
367 170.76 atmosphere 1010 1440 > th dose dependent rect. 19 3
379 170.79 wind 1 14400 < th dose independent rect. 6 2
382 170.80 radiation 10 10 > th dose independent rect. 17 14
386 170.81 atmosphere 1010 720 < th dose independent rect. 7 21
394 170.82 atmosphere 995 720 > th dose dependent rect. 19 8
399 170.84 atmosphere 1010 1440 > th dose dependent rect. 21 1
424 170.91 radiation 1 1440 > th dose independent rect. 8 1
431 170.91 radiation 10 10 > th dose dependent rect. 17 14
437 170.93 atmosphere 1015 720 < th dose independent rect. 20 23
451 170.95 temperature 15 10 > th dose dependent rect. 14 9
475 170.98 atmosphere 1015 720 < th dose dependent rect. 7 6
480 171.00 temperature 20 4320 < th dose independent rect. 13 2
481 171.00 temperature 20 4320 > th dose independent rect. 13 3
483 171.00 radiation 1 30 > th dose dependent rect. 6 1
492 171.02 radiation 10 10 > th dose independent rect. 6 1
556 171.04 atmosphere 1015 270 < th dose dependent rect. 7 13
568 171.07 atmosphere 1010 1440 > th dose dependent sin 18 NA
569 171.07 temperature 30 720 < th dose dependent rect. 9 1
584 171.09 temperature 30 30 < th dose dependent rect. 6 1
613 171.12 atmosphere 1015 270 < th dose dependent rect. 9 11
660 171.21 humidity 60 43200 < th dose independent rect. 1 2
669 171.22 atmosphere 1010 1440 > th dose dependent rect. 8 15
724 171.29 humidity 80 270 > th dose independent rect. 8 7
730 171.30 atmosphere 1015 720 < th dose independent rect. 16 12
746 171.30 atmosphere 1010 720 > th dose dependent rect. 24 20
752 171.32 radiation 1 720 > th dose independent rect. 7 7
755 171.32 humidity 70 270 > th dose dependent rect. 8 8
761 171.32 atmosphere 1005 270 > th dose dependent rect. 3 19
794 171.36 atmosphere 1005 90 > th dose dependent rect. 23 14
810 171.38 temperature 10 43200 > th dose independent rect. 9 6
819 171.39 wind 9 10 < th dose independent rect. 7 23
828 171.39 atmosphere 1005 10 > th dose dependent rect. 6 15
870 171.44 atmosphere 1010 270 < th dose independent rect. 10 10
882 171.45 atmosphere 1010 10 < th dose independent rect. 21 23
894 171.46 atmosphere 1010 10 < th dose independent rect. 18 14
911 171.47 temperature 10 30 > th dose dependent rect. 7 23
932 171.50 atmosphere 1010 720 < th dose independent rect. 2 22
942 171.51 wind 1 4320 > th dose dependent rect. 2 1
962 171.53 temperature 15 4320 > th dose independent rect. 7 8