Os10g0133100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os10g0133100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 177.33 | 0.626 | 5.33 | 0.167 | 0.221 | 2.49 | 0.872 | -18.9 | 0.973 | 4.63 | 28.75 | 4522 | -- | -- |
| 194.85 | 0.65 | 5.02 | 2.94 | 0.142 | 0.972 | 0.727 | -- | 0.827 | 4.21 | -4.196 | 24821 | -- | -- |
| 179.23 | 0.624 | 5.33 | 0.203 | 0.236 | 2.45 | -- | -18.4 | 0.94 | 5.15 | 28.63 | 4522 | -- | -- |
| 196.18 | 0.652 | 5.02 | 2.93 | 0.156 | 0.946 | -- | -- | 0.82 | 5.26 | 16.2 | 24687 | -- | -- |
| 181.73 | 0.628 | 5.32 | 0.322 | -- | 2.47 | -- | -18.3 | 0.939 | -- | 28.55 | 4279 | -- | -- |
| 209.61 | 0.679 | 4.93 | 3.8 | 0.164 | -- | 0.851 | -- | 1.2 | 4.26 | -- | -- | -- | -- |
| 211.59 | 0.681 | 4.94 | 3.79 | 0.173 | -- | -- | -- | 1.19 | 4.8 | -- | -- | -- | -- |
| 197.3 | 0.654 | 5.02 | 2.95 | -- | 0.941 | -- | -- | 0.823 | -- | 16.4 | 24211 | -- | -- |
| 263.91 | 0.757 | 5.23 | -- | 0.154 | 2.91 | -- | -- | -0.0988 | 6.04 | 8.687 | 47520 | -- | -- |
| 213.18 | 0.682 | 4.94 | 3.8 | -- | -- | -- | -- | 1.2 | -- | -- | -- | -- | -- |
| 591.06 | 1.14 | 5.03 | -- | 0.244 | -- | -- | -- | 0.771 | 4.34 | -- | -- | -- | -- |
| 265.15 | 0.758 | 5.23 | -- | -- | 2.92 | -- | -- | -0.0973 | -- | 8.701 | 47520 | -- | -- |
| 594.26 | 1.14 | 5.03 | -- | -- | -- | -- | -- | 0.776 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 159.99 | radiation | 20 | 43200 | > th | dose independent | rect. | 15 | 16 |
| 2 | 160.07 | radiation | 20 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 17 | 160.36 | radiation | 20 | 43200 | > th | dose dependent | rect. | 14 | 3 |
| 31 | 160.40 | radiation | 20 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 49 | 160.62 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 101 | 161.80 | humidity | 60 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 109 | 162.08 | radiation | 30 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 114 | 162.08 | radiation | 30 | 43200 | < th | dose independent | rect. | 14 | 16 |
| 117 | 162.09 | radiation | 30 | 43200 | < th | dose independent | rect. | 14 | 12 |
| 122 | 162.18 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 138 | 162.24 | radiation | 20 | 43200 | > th | dose dependent | sin | 14 | NA |
| 154 | 162.30 | radiation | 40 | 43200 | < th | dose independent | sin | 15 | NA |
| 169 | 162.34 | radiation | 40 | 43200 | < th | dose independent | rect. | 12 | 20 |
| 174 | 162.38 | wind | 1 | 43200 | < th | dose dependent | rect. | 18 | 9 |
| 177 | 162.50 | radiation | 40 | 43200 | < th | dose independent | rect. | 12 | 5 |
| 185 | 162.50 | radiation | 40 | 43200 | < th | dose independent | rect. | 12 | 18 |
| 225 | 162.59 | wind | 1 | 43200 | < th | dose dependent | rect. | 22 | 4 |
| 235 | 162.62 | radiation | 20 | 43200 | > th | dose independent | sin | 13 | NA |
| 260 | 162.76 | radiation | 30 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 264 | 162.81 | radiation | 40 | 43200 | < th | dose dependent | rect. | 14 | 16 |
| 283 | 162.88 | radiation | 40 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 309 | 163.03 | radiation | 40 | 43200 | < th | dose dependent | rect. | 14 | 5 |
| 315 | 163.04 | radiation | 40 | 43200 | < th | dose dependent | rect. | 14 | 12 |
| 325 | 163.09 | radiation | 40 | 43200 | < th | dose dependent | rect. | 14 | 3 |
| 326 | 163.10 | humidity | 60 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 438 | 163.82 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 22 |
| 450 | 163.86 | radiation | 40 | 43200 | < th | dose dependent | sin | 14 | NA |
| 517 | 164.02 | radiation | 40 | 43200 | < th | dose independent | no | NA | NA |
| 519 | 164.02 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 10 |
| 601 | 164.02 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 23 |
| 780 | 164.31 | humidity | 60 | 43200 | < th | dose independent | rect. | 18 | 19 |
| 841 | 164.44 | radiation | 30 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 915 | 164.62 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 982 | 164.74 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 6 |