Os10g0130800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0130800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 192.3 | 0.652 | 5.28 | -1.71 | 0.0744 | -0.387 | -0.631 | -4.25 | -0.138 | 19.4 | 30.3 | 40 | -- | -- |
| 195.48 | 0.656 | 5.24 | -1.42 | 0.0301 | -0.788 | -0.787 | -- | -0.135 | 18.8 | 30.3 | 40 | -- | -- |
| 193.33 | 0.648 | 5.28 | -1.7 | 0.0765 | -0.393 | -- | -4.26 | -0.138 | 20.8 | 30.3 | 39 | -- | -- |
| 195.58 | 0.651 | 5.25 | -1.39 | 0.0966 | -0.854 | -- | -- | -0.146 | 19.3 | 30.2 | 64 | -- | -- |
| 193.68 | 0.648 | 5.28 | -1.7 | -- | -0.383 | -- | -4.31 | -0.141 | -- | 30.32 | 39 | -- | -- |
| 211.77 | 0.682 | 5.22 | -1.49 | 0.149 | -- | 1.02 | -- | -0.072 | 5.15 | -- | -- | -- | -- |
| 213.55 | 0.684 | 5.23 | -1.49 | 0.191 | -- | -- | -- | -0.0777 | 2.6 | -- | -- | -- | -- |
| 195.99 | 0.652 | 5.25 | -1.4 | -- | -0.829 | -- | -- | -0.145 | -- | 30.39 | 48 | -- | -- |
| 244.87 | 0.729 | 5.22 | -- | 0.156 | -0.988 | -- | -- | 0.00435 | 19.2 | 30.1 | 87 | -- | -- |
| 215.68 | 0.686 | 5.23 | -1.48 | -- | -- | -- | -- | -0.0729 | -- | -- | -- | -- | -- |
| 272.19 | 0.772 | 5.19 | -- | 0.162 | -- | -- | -- | 0.0884 | 2.48 | -- | -- | -- | -- |
| 246.03 | 0.731 | 5.21 | -- | -- | -0.961 | -- | -- | 0.00401 | -- | 30.1 | 79 | -- | -- |
| 273.73 | 0.772 | 5.19 | -- | -- | -- | -- | -- | 0.0917 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 185.29 | temperature | 30.0 | 90 | > th | dose independent | sin | 3 | NA |
| 4 | 186.58 | temperature | 30.0 | 90 | > th | dose independent | rect. | 8 | 8 |
| 19 | 186.79 | temperature | 30.0 | 90 | < th | dose independent | sin | 3 | NA |
| 95 | 189.49 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 22 |
| 97 | 189.67 | temperature | 30.0 | 90 | < th | dose independent | rect. | 23 | 14 |
| 115 | 190.33 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 10 |
| 118 | 190.63 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 16 |
| 150 | 191.40 | temperature | 30.0 | 10 | > th | dose dependent | sin | 5 | NA |
| 185 | 191.99 | wind | 1.0 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 221 | 192.82 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 241 | 192.92 | temperature | 30.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 242 | 192.94 | temperature | 30.0 | 90 | < th | dose independent | rect. | 14 | 23 |
| 244 | 193.00 | wind | 1.0 | 720 | > th | dose independent | rect. | 4 | 15 |
| 248 | 193.11 | temperature | 30.0 | 30 | > th | dose independent | no | NA | NA |
| 349 | 193.11 | temperature | 30.0 | 30 | > th | dose independent | rect. | 15 | 23 |
| 357 | 193.19 | temperature | 30.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 358 | 193.20 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 362 | 193.25 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 378 | 193.32 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 14 |
| 471 | 193.34 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 495 | 193.46 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 3 | 13 |
| 496 | 193.46 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 18 |
| 497 | 193.50 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 19 | 14 |
| 528 | 193.64 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 530 | 193.67 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 536 | 193.68 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 541 | 193.71 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 19 | 5 |
| 544 | 193.74 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 18 | 16 |
| 566 | 193.81 | wind | 1.0 | 720 | < th | dose dependent | rect. | 5 | 7 |
| 567 | 193.82 | temperature | 30.0 | 30 | > th | dose dependent | rect. | 9 | 7 |
| 582 | 193.83 | temperature | 30.0 | 90 | < th | dose independent | no | NA | NA |
| 607 | 193.89 | wind | 1.0 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 659 | 193.99 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 663 | 194.01 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 687 | 194.09 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 4 |
| 711 | 194.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 13 |
| 747 | 194.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 749 | 194.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 13 |
| 750 | 194.26 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 13 |
| 775 | 194.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 11 |
| 791 | 194.33 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 11 |
| 792 | 194.33 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 24 | 10 |
| 793 | 194.33 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 802 | 194.35 | temperature | 30.0 | 90 | < th | dose independent | rect. | 7 | 23 |
| 811 | 194.39 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 813 | 194.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 818 | 194.40 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 9 | NA |
| 820 | 194.41 | temperature | 25.0 | 4320 | < th | dose independent | sin | 10 | NA |
| 823 | 194.41 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 23 |
| 826 | 194.42 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 833 | 194.44 | wind | 1.0 | 720 | < th | dose independent | rect. | 4 | 2 |
| 836 | 194.44 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 18 |
| 838 | 194.45 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 872 | 194.49 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 889 | 194.51 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 19 | 12 |
| 893 | 194.52 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 22 | 9 |
| 894 | 194.52 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 896 | 194.53 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 1 | 6 |
| 909 | 194.54 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 22 |
| 910 | 194.54 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 920 | 194.57 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 927 | 194.60 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 954 | 194.69 | temperature | 25.0 | 4320 | > th | dose independent | sin | 10 | NA |
| 970 | 194.74 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 971 | 194.74 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 1 |