Os10g0130200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0130200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like F-box domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.73 | 0.39 | 3.12 | 0.211 | 0.22 | 1.13 | -0.137 | 1.34 | 0.0466 | 10.3 | 22.57 | 661 | -- | -- |
| 70.27 | 0.39 | 3.09 | 0.362 | 0.225 | 0.85 | 0.0932 | -- | 0.0987 | 10.2 | 23.95 | 722 | -- | -- |
| 68.79 | 0.386 | 3.11 | 0.216 | 0.221 | 1.11 | -- | 1.24 | 0.0486 | 10.2 | 22.6 | 662 | -- | -- |
| 70.29 | 0.39 | 3.09 | 0.357 | 0.229 | 0.833 | -- | -- | 0.0931 | 10.1 | 23.83 | 703 | -- | -- |
| 71.53 | 0.394 | 3.12 | 0.23 | -- | 1.22 | -- | 1.32 | 0.063 | -- | 22.65 | 724 | -- | -- |
| 79.86 | 0.419 | 3.12 | 0.129 | 0.325 | -- | 0.0679 | -- | -0.0601 | 10.1 | -- | -- | -- | -- |
| 79.87 | 0.419 | 3.12 | 0.131 | 0.325 | -- | -- | -- | -0.06 | 10.1 | -- | -- | -- | -- |
| 72.61 | 0.397 | 3.09 | 0.383 | -- | 0.898 | -- | -- | 0.137 | -- | 27.07 | 719 | -- | -- |
| 73.21 | 0.399 | 3.1 | -- | 0.247 | 0.674 | -- | -- | 0.0279 | 10 | 23.85 | 680 | -- | -- |
| 86.23 | 0.434 | 3.13 | 0.127 | -- | -- | -- | -- | -0.0603 | -- | -- | -- | -- | -- |
| 80.33 | 0.419 | 3.12 | -- | 0.324 | -- | -- | -- | -0.0746 | 10 | -- | -- | -- | -- |
| 76.03 | 0.406 | 3.1 | -- | -- | 0.746 | -- | -- | 0.0653 | -- | 27.18 | 705 | -- | -- |
| 86.66 | 0.435 | 3.13 | -- | -- | -- | -- | -- | -0.0744 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.58 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 13 | 67.22 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 3 |
| 20 | 67.40 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 12 |
| 25 | 67.48 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 7 |
| 27 | 67.49 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 9 |
| 36 | 67.57 | temperature | 25 | 720 | < th | dose dependent | sin | 9 | NA |
| 38 | 67.59 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |
| 114 | 68.04 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 12 |
| 277 | 68.74 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 1 |
| 291 | 68.78 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 17 |
| 300 | 68.83 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 9 |
| 337 | 68.99 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 12 |
| 372 | 69.07 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |
| 409 | 69.14 | temperature | 20 | 720 | < th | dose independent | sin | 8 | NA |
| 565 | 69.46 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 567 | 69.47 | temperature | 20 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 619 | 69.58 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 627 | 69.59 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 805 | 69.92 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 814 | 69.94 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 21 |
| 954 | 70.18 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 955 | 70.18 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 23 |