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Os10g0127700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF639 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.88 (0.0183) R2 : 0.0272
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.138 (0.0386) R2dN8 : 0.0351 R2N8 : 0.0272
σ : 0.345
deviance : 54.76
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
35.46 0.28 7.86 -0.0562 0.351 0.714 -0.58 -0.191 -0.0707 9.01 0.5372 1393 -- --
35.4 0.277 7.86 -0.0766 0.312 0.78 -0.625 -- -0.0707 8.77 0.4798 1374 -- --
36.41 0.281 7.85 -0.0445 0.315 0.667 -- -0.563 -0.0926 9.15 0.5199 1362 -- --
36.65 0.282 7.86 -0.0981 0.296 0.763 -- -- -0.0808 9.15 0.4699 1366 -- --
36.58 0.282 7.86 0.0146 -- 0.89 -- -0.58 -0.0836 -- 0.8102 1217 -- --
41.49 0.302 7.88 -0.248 0.421 -- -0.481 -- -0.168 9.45 -- -- -- --
42.29 0.305 7.88 -0.265 0.422 -- -- -- -0.168 9.69 -- -- -- --
37.24 0.284 7.86 -0.112 -- 0.951 -- -- -0.0765 -- 0.47 1222 -- --
36.88 0.283 7.86 -- 0.301 0.807 -- -- -0.0677 9.15 0.46 1367 -- --
52.86 0.34 7.89 -0.269 -- -- -- -- -0.168 -- -- -- -- --
44.14 0.311 7.87 -- 0.422 -- -- -- -0.139 9.74 -- -- -- --
37.52 0.285 7.86 -- -- 1.01 -- -- -0.0686 -- 0.4699 1232 -- --
54.76 0.345 7.88 -- -- -- -- -- -0.138 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.25 temperature 30.0 270 < th dose dependent rect. 1 6
3 33.50 temperature 10.0 270 > th dose dependent rect. 19 8
9 33.76 temperature 10.0 270 > th dose dependent rect. 20 16
17 34.20 temperature 15.0 270 > th dose independent rect. 8 17
21 34.32 humidity 90.0 270 < th dose independent rect. 8 17
24 34.43 temperature 10.0 10 > th dose dependent rect. 9 20
32 34.59 precipitation 0.1 270 < th dose independent rect. 6 23
33 34.59 precipitation 0.1 270 < th dose dependent rect. 6 23
41 34.70 temperature 25.0 270 < th dose independent rect. 1 7
54 34.81 radiation 1.0 1440 < th dose dependent rect. 16 1
55 34.82 radiation 1.0 270 > th dose independent rect. 7 7
60 34.84 temperature 25.0 270 < th dose independent rect. 3 4
62 34.84 temperature 10.0 270 > th dose dependent rect. 8 17
68 34.90 temperature 15.0 14400 > th dose independent rect. 9 2
69 34.91 temperature 15.0 14400 < th dose independent rect. 9 1
70 34.92 temperature 15.0 30 > th dose dependent rect. 23 6
73 34.93 wind 7.0 270 < th dose independent rect. 7 7
76 34.95 temperature 30.0 90 < th dose dependent rect. 15 18
79 34.96 precipitation 0.1 270 < th dose independent rect. 8 17
80 34.96 precipitation 0.1 270 < th dose dependent rect. 8 17
81 34.97 radiation 1.0 720 < th dose dependent rect. 16 9
83 34.98 wind 7.0 270 < th dose independent rect. 8 5
94 35.01 wind 9.0 270 < th dose independent rect. 8 17
96 35.02 radiation 1.0 1440 < th dose independent rect. 16 1
97 35.02 temperature 30.0 90 < th dose dependent rect. 5 4
100 35.04 radiation 20.0 14400 < th dose independent rect. 20 10
101 35.05 radiation 1.0 1440 > th dose independent rect. 16 1
116 35.14 humidity 90.0 270 < th dose independent rect. 20 17
117 35.14 temperature 30.0 270 < th dose dependent rect. 5 1
123 35.16 temperature 15.0 270 > th dose independent rect. 19 8
126 35.18 temperature 15.0 270 > th dose independent rect. 7 6
128 35.18 radiation 40.0 270 < th dose independent rect. 1 7
134 35.19 wind 9.0 270 < th dose independent rect. 1 7
135 35.19 temperature 10.0 270 > th dose independent rect. 1 7
138 35.19 humidity 50.0 270 > th dose independent rect. 1 7
140 35.19 atmosphere 995.0 270 > th dose independent rect. 1 7
141 35.19 atmosphere 1015.0 270 < th dose independent rect. 1 7
145 35.20 temperature 15.0 270 > th dose independent rect. 21 15
148 35.21 atmosphere 995.0 270 > th dose independent rect. 14 17
164 35.25 radiation 20.0 14400 < th dose independent rect. 24 6
166 35.25 radiation 40.0 270 < th dose independent rect. 14 17
167 35.25 radiation 1.0 1440 < th dose dependent rect. 13 5
170 35.26 precipitation 0.1 270 < th dose independent rect. 7 7
173 35.26 precipitation 0.1 270 < th dose dependent rect. 7 7
192 35.30 humidity 50.0 270 > th dose independent rect. 7 7
195 35.31 temperature 15.0 14400 < th dose independent rect. 5 7
197 35.31 wind 9.0 270 < th dose independent rect. 14 17
201 35.31 radiation 1.0 1440 < th dose dependent rect. 10 8
211 35.33 atmosphere 995.0 270 > th dose independent rect. 7 7
212 35.33 atmosphere 1015.0 270 < th dose independent rect. 7 7
213 35.33 temperature 10.0 270 > th dose independent rect. 14 17
230 35.36 precipitation 0.1 270 < th dose independent rect. 1 7
234 35.36 precipitation 0.1 270 < th dose dependent rect. 1 7
237 35.37 humidity 50.0 270 > th dose independent rect. 14 17
247 35.39 radiation 1.0 720 > th dose independent rect. 8 11
261 35.40 radiation 1.0 14400 < th dose independent rect. 9 1
266 35.41 radiation 1.0 1440 < th dose independent rect. 13 5
268 35.41 radiation 1.0 1440 > th dose independent rect. 10 8
270 35.41 temperature 15.0 30 > th dose independent rect. 9 20
274 35.42 radiation 1.0 1440 > th dose independent rect. 13 5
280 35.43 radiation 1.0 14400 > th dose independent rect. 9 1
286 35.43 radiation 1.0 720 < th dose dependent sin 15 NA
290 35.44 radiation 1.0 1440 < th dose independent rect. 10 8
304 35.46 precipitation 0.1 270 < th dose independent rect. 18 9
308 35.46 precipitation 0.1 270 < th dose dependent rect. 18 9
326 35.48 humidity 90.0 270 < th dose independent rect. 7 6
330 35.48 temperature 10.0 10 > th dose dependent rect. 23 16
343 35.50 humidity 50.0 270 > th dose dependent rect. 15 16
372 35.54 wind 7.0 270 < th dose independent rect. 5 1
374 35.54 temperature 10.0 270 > th dose independent rect. 5 1
376 35.54 temperature 30.0 270 < th dose independent rect. 5 1
377 35.54 humidity 50.0 270 > th dose independent rect. 5 1
380 35.54 atmosphere 995.0 270 > th dose independent rect. 5 1
381 35.54 atmosphere 1015.0 270 < th dose independent rect. 5 1
382 35.54 radiation 20.0 270 < th dose independent rect. 5 1
397 35.54 wind 1.0 270 > th dose independent rect. 1 7
401 35.54 wind 9.0 270 < th dose independent rect. 6 23
402 35.54 temperature 10.0 270 > th dose independent rect. 6 23
416 35.55 radiation 1.0 1440 < th dose dependent rect. 10 19
423 35.57 wind 5.0 14400 > th dose independent rect. 5 1
424 35.57 precipitation 0.1 270 < th dose independent rect. 5 1
426 35.57 precipitation 0.1 270 < th dose dependent rect. 5 1
427 35.57 radiation 40.0 270 < th dose dependent rect. 2 6
450 35.58 humidity 50.0 270 > th dose dependent rect. 1 7
458 35.59 wind 5.0 14400 < th dose independent rect. 5 1
489 35.60 atmosphere 995.0 270 > th dose independent rect. 3 15
503 35.61 wind 1.0 270 > th dose independent rect. 8 17
504 35.61 radiation 1.0 1440 < th dose dependent sin 20 NA
517 35.62 precipitation 0.1 270 < th dose independent rect. 14 17
521 35.62 humidity 50.0 270 > th dose dependent rect. 5 1
529 35.62 precipitation 0.1 270 < th dose dependent rect. 14 17
544 35.64 atmosphere 1015.0 270 < th dose independent rect. 14 17
550 35.65 wind 9.0 270 < th dose independent rect. 18 9
566 35.66 radiation 10.0 270 < th dose independent rect. 18 9
567 35.66 radiation 1.0 720 < th dose independent rect. 15 10
571 35.66 radiation 40.0 270 < th dose dependent rect. 5 1
573 35.66 humidity 50.0 270 > th dose dependent rect. 3 4
579 35.67 humidity 90.0 270 < th dose independent rect. 19 7
582 35.67 humidity 50.0 270 > th dose independent rect. 18 9
586 35.67 temperature 10.0 270 > th dose independent rect. 3 15
587 35.67 atmosphere 1015.0 270 < th dose independent rect. 3 15
588 35.67 wind 9.0 90 < th dose independent rect. 9 20
594 35.68 humidity 90.0 720 > th dose dependent rect. 15 8
597 35.68 radiation 30.0 270 < th dose dependent rect. 18 9
607 35.69 wind 7.0 14400 > th dose independent rect. 3 13
608 35.69 wind 7.0 14400 < th dose independent rect. 3 13
609 35.69 wind 7.0 270 < th dose independent rect. 21 15
624 35.70 wind 7.0 14400 > th dose independent rect. 24 16
629 35.71 wind 3.0 4320 > th dose independent rect. 21 1
630 35.71 wind 1.0 270 > th dose independent rect. 7 7
635 35.71 wind 7.0 14400 < th dose independent rect. 24 16
637 35.71 radiation 1.0 1440 < th dose independent rect. 10 20
638 35.71 radiation 40.0 270 < th dose dependent rect. 3 4
643 35.72 radiation 1.0 1440 < th dose independent sin 21 NA
652 35.72 humidity 90.0 720 > th dose dependent rect. 9 14
653 35.72 wind 9.0 270 < th dose dependent rect. 8 17
668 35.73 wind 5.0 14400 > th dose dependent rect. 3 13
670 35.74 radiation 1.0 1440 > th dose independent sin 21 NA
697 35.74 wind 7.0 14400 > th dose independent rect. 24 18
724 35.75 wind 7.0 14400 > th dose independent rect. 3 16
732 35.75 precipitation 0.1 90 < th dose independent rect. 9 20
743 35.75 precipitation 0.1 90 < th dose dependent rect. 9 20
746 35.76 temperature 30.0 270 < th dose independent rect. 8 5
797 35.77 atmosphere 995.0 270 > th dose independent rect. 18 9
819 35.77 wind 5.0 14400 > th dose dependent rect. 5 1
832 35.78 wind 3.0 4320 < th dose independent rect. 21 1
849 35.78 atmosphere 995.0 270 > th dose independent rect. 8 17
872 35.79 wind 7.0 14400 > th dose independent sin 2 NA
902 35.80 wind 7.0 14400 < th dose independent sin 2 NA
906 35.80 temperature 30.0 270 < th dose independent rect. 19 8
974 35.81 wind 7.0 14400 > th dose dependent rect. 24 21
988 35.82 wind 5.0 14400 > th dose dependent sin 1 NA