Os10g0126800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os10g0126800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.47 | 0.522 | 3.04 | 1.96 | 0.744 | -1.62 | 1.71 | 19.7 | 0.00744 | 20.6 | 30.79 | 422 | -- | -- |
| 128.31 | 0.528 | 3.19 | 0.743 | 0.875 | 1.56 | 1.78 | -- | -0.0201 | 20.2 | 34.98 | 106 | -- | -- |
| 132.38 | 0.536 | 3.03 | 1.96 | 0.725 | -1.58 | -- | 20.1 | 0.0163 | 20.2 | 30.85 | 459 | -- | -- |
| 139.07 | 0.549 | 3.19 | 0.748 | 0.857 | 1.86 | -- | -- | -0.0179 | 19.9 | 35.1 | 110 | -- | -- |
| 157.66 | 0.585 | 3 | 1.97 | -- | -1.21 | -- | 20.5 | 0.0386 | -- | 30.97 | 492 | -- | -- |
| 131.68 | 0.538 | 3.19 | 0.814 | 0.865 | -- | 1.95 | -- | -0.0284 | 20.2 | -- | -- | -- | -- |
| 142.94 | 0.56 | 3.19 | 0.761 | 0.872 | -- | -- | -- | -0.0253 | 19.8 | -- | -- | -- | -- |
| 162.08 | 0.593 | 3.15 | 0.669 | -- | 1.81 | -- | -- | 0.0175 | -- | 35.01 | 463 | -- | -- |
| 152.82 | 0.576 | 3.19 | -- | 0.824 | 1.98 | -- | -- | -0.0581 | 20.1 | 35.1 | 254 | -- | -- |
| 184.22 | 0.634 | 3.17 | 0.751 | -- | -- | -- | -- | -0.0373 | -- | -- | -- | -- | -- |
| 158.2 | 0.588 | 3.21 | -- | 0.867 | -- | -- | -- | -0.11 | 19.9 | -- | -- | -- | -- |
| 173.65 | 0.614 | 3.17 | -- | -- | 1.88 | -- | -- | -0.0478 | -- | 34.98 | 463 | -- | -- |
| 199.09 | 0.659 | 3.19 | -- | -- | -- | -- | -- | -0.121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 118.62 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 16 | 119.00 | humidity | 90.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 55 | 120.92 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 9 |
| 56 | 121.03 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 16 |
| 65 | 121.40 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 5 | 5 |
| 84 | 121.96 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 8 |
| 91 | 122.17 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 14 | 7 |
| 93 | 122.22 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 19 | 9 |
| 101 | 122.24 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 12 | 16 |
| 118 | 122.51 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 9 |
| 119 | 122.53 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 11 |
| 121 | 122.57 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 13 | 3 |
| 124 | 122.60 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 11 | 5 |
| 132 | 122.67 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 23 |
| 136 | 122.68 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 150 | 122.78 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 17 |
| 190 | 123.02 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 14 | 1 |
| 228 | 123.21 | radiation | 10.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 246 | 123.28 | radiation | 10.0 | 270 | < th | dose independent | rect. | 13 | 15 |
| 250 | 123.29 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 20 | 8 |
| 254 | 123.32 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 23 |
| 255 | 123.32 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 15 | 1 |
| 261 | 123.34 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 268 | 123.36 | humidity | 90.0 | 1440 | > th | dose dependent | sin | 3 | NA |
| 275 | 123.40 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 20 |
| 279 | 123.41 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 11 |
| 286 | 123.45 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 18 |
| 293 | 123.47 | radiation | 20.0 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 309 | 123.49 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 334 | 123.61 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 21 | 5 |
| 335 | 123.61 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 336 | 123.61 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 21 | 5 |
| 337 | 123.61 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 13 | 6 |
| 355 | 123.62 | humidity | 70.0 | 270 | > th | dose independent | rect. | 12 | 16 |
| 363 | 123.66 | temperature | 30.0 | 270 | > th | dose dependent | sin | 15 | NA |
| 370 | 123.69 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 6 |
| 413 | 123.76 | wind | 5.0 | 270 | < th | dose independent | rect. | 17 | 15 |
| 415 | 123.77 | wind | 1.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 428 | 123.82 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 451 | 123.90 | wind | 1.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 459 | 123.92 | wind | 5.0 | 10 | < th | dose independent | rect. | 15 | 5 |
| 464 | 123.94 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 9 |
| 489 | 123.99 | humidity | 70.0 | 270 | < th | dose dependent | rect. | 15 | 1 |
| 491 | 123.99 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 6 | 3 |
| 500 | 124.01 | temperature | 30.0 | 270 | < th | dose independent | sin | 18 | NA |
| 551 | 124.11 | humidity | 90.0 | 720 | < th | dose independent | rect. | 14 | 2 |
| 553 | 124.11 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 4 | 5 |
| 569 | 124.13 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 11 |
| 611 | 124.18 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 624 | 124.21 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 11 |
| 628 | 124.21 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 7 | 13 |
| 630 | 124.22 | humidity | 90.0 | 720 | < th | dose independent | rect. | 13 | 5 |
| 641 | 124.23 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 12 | 5 |
| 723 | 124.37 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 18 |
| 729 | 124.38 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 4 | 6 |
| 768 | 124.44 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 769 | 124.44 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 776 | 124.45 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 10 |
| 791 | 124.47 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 11 | 16 |
| 793 | 124.48 | wind | 1.0 | 10 | > th | dose independent | rect. | 20 | 8 |
| 817 | 124.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 820 | 124.52 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 824 | 124.52 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 830 | 124.52 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 831 | 124.52 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 844 | 124.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 16 |
| 861 | 124.54 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 4 |
| 863 | 124.54 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 9 | 7 |
| 875 | 124.57 | radiation | 10.0 | 270 | < th | dose independent | rect. | 4 | 5 |
| 882 | 124.57 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 10 |
| 891 | 124.59 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 15 | 1 |
| 892 | 124.59 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 934 | 124.63 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 939 | 124.63 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 17 | 7 |
| 950 | 124.66 | temperature | 25.0 | 270 | > th | dose independent | rect. | 15 | 1 |
| 958 | 124.67 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 24 | 17 |
| 998 | 124.72 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 18 |
| 1000 | 124.72 | wind | 9.0 | 10 | < th | dose dependent | rect. | 15 | 5 |