Os10g0126000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os10g0126000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.23 | 0.271 | 8.32 | 0.192 | 0.778 | 0.302 | -0.762 | -0.0453 | 0.0759 | 10.7 | 20.7 | 10 | -- | -- |
| 33.24 | 0.269 | 8.32 | 0.201 | 0.778 | 0.304 | -0.78 | -- | 0.0774 | 10.7 | 20.69 | 10 | -- | -- |
| 35.43 | 0.279 | 8.33 | 0.126 | 0.787 | 0.28 | -- | -0.269 | 0.0685 | 10.9 | 20.7 | 10 | -- | -- |
| 35.77 | 0.279 | 8.32 | 0.174 | 0.784 | 0.295 | -- | -- | 0.0781 | 10.8 | 20.6 | 10 | -- | -- |
| 70.41 | 0.393 | 8.36 | 0.0576 | -- | 0.494 | -- | -0.219 | 0.0105 | -- | 21.1 | 4 | -- | -- |
| 37.3 | 0.286 | 8.31 | 0.276 | 0.842 | -- | -0.74 | -- | 0.138 | 10.9 | -- | -- | -- | -- |
| 39.59 | 0.295 | 8.31 | 0.246 | 0.845 | -- | -- | -- | 0.136 | 11 | -- | -- | -- | -- |
| 70.7 | 0.393 | 8.35 | 0.107 | -- | 0.5 | -- | -- | 0.0214 | -- | 21.07 | 4 | -- | -- |
| 35.87 | 0.279 | 8.32 | -- | 0.762 | 0.418 | -- | -- | 0.0746 | 10.8 | 19 | 7 | -- | -- |
| 84.07 | 0.428 | 8.33 | 0.227 | -- | -- | -- | -- | 0.13 | -- | -- | -- | -- | -- |
| 41.19 | 0.3 | 8.32 | -- | 0.843 | -- | -- | -- | 0.109 | 11 | -- | -- | -- | -- |
| 70.99 | 0.394 | 8.36 | -- | -- | 0.512 | -- | -- | 0.00715 | -- | 21.05 | 5 | -- | -- |
| 85.44 | 0.431 | 8.34 | -- | -- | -- | -- | -- | 0.105 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.26 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 14 |
| 6 | 28.80 | temperature | 25.0 | 90 | < th | dose independent | rect. | 16 | 14 |
| 13 | 29.16 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 16 | 29.28 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 38 | 30.14 | temperature | 25.0 | 270 | < th | dose independent | rect. | 22 | 6 |
| 42 | 30.26 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 5 |
| 73 | 30.67 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 137 | 31.11 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 139 | 31.12 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 9 |
| 144 | 31.15 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 148 | 31.16 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 9 |
| 154 | 31.24 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 194 | 31.37 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 7 |
| 220 | 31.54 | temperature | 25.0 | 90 | < th | dose independent | sin | 11 | NA |
| 254 | 31.67 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 16 |
| 282 | 31.77 | temperature | 20.0 | 10 | > th | dose independent | rect. | 15 | 12 |
| 310 | 31.86 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 9 |
| 317 | 31.87 | temperature | 25.0 | 270 | > th | dose independent | rect. | 18 | 13 |
| 339 | 31.92 | radiation | 40.0 | 90 | < th | dose independent | rect. | 6 | 19 |
| 345 | 31.94 | temperature | 20.0 | 720 | > th | dose independent | rect. | 13 | 3 |
| 347 | 31.94 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 13 |
| 350 | 31.95 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 5 |
| 395 | 32.08 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 2 | 5 |
| 435 | 32.19 | temperature | 25.0 | 90 | > th | dose independent | sin | 11 | NA |
| 449 | 32.22 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 454 | 32.23 | temperature | 30.0 | 10 | < th | dose dependent | sin | 11 | NA |
| 459 | 32.24 | radiation | 40.0 | 270 | < th | dose independent | rect. | 4 | 11 |
| 469 | 32.27 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 472 | 32.27 | temperature | 10.0 | 10 | > th | dose dependent | sin | 10 | NA |
| 484 | 32.29 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 5 |
| 486 | 32.29 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 503 | 32.31 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 513 | 32.34 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 519 | 32.35 | radiation | 10.0 | 30 | < th | dose independent | rect. | 3 | 3 |
| 529 | 32.36 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 3 | 7 |
| 533 | 32.37 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 21 |
| 535 | 32.37 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 550 | 32.39 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 3 |
| 551 | 32.39 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 564 | 32.41 | wind | 5.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 578 | 32.43 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 586 | 32.44 | temperature | 20.0 | 720 | > th | dose independent | rect. | 15 | 1 |
| 587 | 32.44 | temperature | 25.0 | 30 | < th | dose independent | rect. | 3 | 3 |
| 590 | 32.44 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 21 |
| 596 | 32.44 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 6 | 21 |
| 597 | 32.44 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 21 |
| 612 | 32.47 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 3 |
| 615 | 32.47 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 3 |
| 618 | 32.47 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 3 |
| 619 | 32.47 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 3 | 3 |
| 628 | 32.47 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 677 | 32.52 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 693 | 32.54 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 13 |
| 700 | 32.55 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 728 | 32.59 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 19 |
| 737 | 32.60 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 741 | 32.61 | temperature | 20.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 742 | 32.61 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 754 | 32.62 | radiation | 40.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 768 | 32.64 | temperature | 25.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 781 | 32.66 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 785 | 32.66 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 804 | 32.68 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 21 |
| 825 | 32.71 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 832 | 32.71 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 833 | 32.71 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 5 |
| 853 | 32.74 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 5 |
| 863 | 32.74 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 5 |
| 871 | 32.75 | wind | 7.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 872 | 32.75 | radiation | 10.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 885 | 32.76 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 15 | 12 |
| 898 | 32.78 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 3 |
| 906 | 32.78 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 916 | 32.79 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 1 | 5 |
| 918 | 32.80 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 919 | 32.80 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 922 | 32.80 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 9 |
| 927 | 32.81 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 930 | 32.81 | humidity | 50.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 933 | 32.81 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 934 | 32.81 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 949 | 32.81 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 956 | 32.82 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 19 |
| 963 | 32.82 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 19 |
| 965 | 32.83 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 968 | 32.83 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 971 | 32.83 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 972 | 32.83 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 974 | 32.83 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 981 | 32.83 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 994 | 32.84 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 20 |