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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0125700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Disease resistance protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.98 (0.0488) R2 : 0.355
β1 : 1.23 (0.21) R2dD : 0.0781 R2D : 0.0604
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.54 (0.193) R2dE : 0.294 R2E : 0.092
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 3.5 (0.687) R2dD*E : 0.0571 R2D*E : 0.0703
γ1 : 0.615 (0.11) R2dN8 : 0.0739 R2N8 : -0.0346
σ : 0.863
deviance : 343.3
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 28.32
memory length : 3
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
325.33 0.847 4.03 0.904 0.555 2.11 -1.16 4.41 0.483 0.901 27.56 6 -- --
345.13 0.865 3.96 1.73 0.615 2.08 0.462 -- 0.63 23.3 30.18 49 -- --
328.21 0.85 4.01 1.1 0.575 2.08 -- 3.45 0.53 0.133 27.56 6 -- --
345.73 0.866 3.95 1.69 0.555 2.05 -- -- 0.652 23.8 29.76 10 -- --
343.3 0.863 3.98 1.23 -- 2.54 -- 3.5 0.615 -- 28.32 3 -- --
401.62 0.94 4.04 1.23 1.18 -- 0.46 -- 0.245 1.1 -- -- -- --
402.48 0.939 4.05 1.21 1.18 -- -- -- 0.242 1.15 -- -- -- --
360.27 0.884 3.92 1.82 -- 2.52 -- -- 0.739 -- 29.86 8 -- --
414.21 0.953 4.03 -- 0.78 1.36 -- -- 0.32 0.626 30.72 10 -- --
489.47 1.03 4.03 1.26 -- -- -- -- 0.266 -- -- -- -- --
441.09 0.982 4.08 -- 1.21 -- -- -- 0.108 1.19 -- -- -- --
442.09 0.982 3.99 -- -- 2.04 -- -- 0.442 -- 30.4 5 -- --
531.06 1.08 4.06 -- -- -- -- -- 0.127 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 317.25 temperature 25 90 < th dose dependent rect. 24 23
3 320.77 temperature 30 10 < th dose dependent rect. 12 20
4 321.10 temperature 10 720 > th dose dependent rect. 15 19
5 321.12 temperature 20 720 > th dose dependent rect. 15 18
15 322.54 temperature 30 30 < th dose dependent rect. 5 23
21 322.87 temperature 10 720 > th dose dependent rect. 13 14
31 323.50 temperature 30 270 < th dose dependent rect. 11 19
36 323.80 temperature 10 720 > th dose dependent rect. 15 10
113 326.60 temperature 20 1440 > th dose dependent rect. 17 1
115 326.76 temperature 10 720 > th dose dependent rect. 7 20
127 327.02 temperature 10 720 > th dose dependent sin 16 NA
140 327.44 temperature 30 10 < th dose dependent rect. 3 23
176 328.17 temperature 25 1440 > th dose independent rect. 11 14
202 328.50 temperature 30 1440 < th dose dependent rect. 17 2
220 328.60 temperature 25 1440 > th dose independent rect. 7 19
234 328.71 temperature 25 1440 < th dose independent rect. 11 15
242 328.76 temperature 25 1440 < th dose independent rect. 7 19
383 329.72 temperature 30 10 < th dose dependent no NA NA
384 329.73 temperature 25 1440 > th dose independent sin 18 NA
396 329.80 temperature 30 10 < th dose dependent rect. 19 23
419 329.93 temperature 25 1440 < th dose independent sin 18 NA
526 330.51 temperature 30 10 < th dose dependent rect. 15 23
533 330.55 temperature 20 720 > th dose dependent no NA NA
585 330.83 temperature 30 720 < th dose dependent rect. 3 20
627 330.95 temperature 20 720 > th dose dependent rect. 21 23
643 331.02 temperature 25 1440 > th dose independent rect. 11 22
725 331.40 temperature 25 1440 < th dose independent rect. 11 22
733 331.42 temperature 20 720 > th dose dependent rect. 23 23
749 331.48 temperature 10 270 > th dose dependent sin 11 NA
821 331.76 temperature 25 720 > th dose independent rect. 15 20
856 331.88 temperature 30 10 < th dose dependent rect. 17 23
905 332.08 temperature 25 1440 > th dose independent rect. 21 23
930 332.16 temperature 20 10 > th dose dependent rect. 15 23
931 332.17 temperature 25 1440 > th dose independent no NA NA