Os10g0120300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Leucine-rich repeat, plant specific containing protein.
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Os10g0120300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Leucine-rich repeat, plant specific containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 381.19 | 0.917 | 5.56 | 5.45 | 0.336 | -2.07 | 1.02 | -8.61 | 1.09 | 3.21 | 0.1998 | 4334 | 17.7 | 11.9 |
| 515.05 | 1.06 | 5.51 | 4.17 | 0.682 | -1.79 | 1.09 | -- | 1.2 | 3.08 | 11.56 | 14453 | 18.1 | 12.4 |
| 383.25 | 0.912 | 5.55 | 5.42 | 0.284 | -2.11 | -- | -8.57 | 1.08 | 2.63 | 0.2079 | 4322 | 17.6 | 12 |
| 514.97 | 1.06 | 5.49 | 4.23 | 0.669 | -1.83 | -- | -- | 1.14 | 2.24 | 11.56 | 14459 | 18.1 | 12.5 |
| 387.46 | 0.917 | 5.55 | 5.42 | -- | -2.13 | -- | -8.57 | 1.09 | -- | 0.2156 | 4317 | 17.6 | 12 |
| 543.06 | 1.09 | 5.5 | 3.13 | 0.423 | -- | 1.2 | -- | 1.05 | 3.57 | -- | -- | -- | -- |
| 547.25 | 1.1 | 5.51 | 3.11 | 0.428 | -- | -- | -- | 1.05 | 3.04 | -- | -- | -- | -- |
| 510.06 | 1.05 | 5.51 | 4.43 | -- | -1.45 | -- | -- | 1.1 | -- | 18.14 | 11518 | 17 | 12.7 |
| 769.59 | 1.29 | 5.49 | -- | 0.333 | -0.979 | -- | -- | 0.904 | 2.84 | 34.65 | 2870 | 19.6 | 13.5 |
| 557.74 | 1.1 | 5.51 | 3.12 | -- | -- | -- | -- | 1.06 | -- | -- | -- | -- | -- |
| 801.49 | 1.32 | 5.59 | -- | 0.489 | -- | -- | -- | 0.701 | 3.07 | -- | -- | -- | -- |
| 754.04 | 1.28 | 5.49 | -- | -- | -1.47 | -- | -- | 0.767 | -- | 52.65 | 2773 | 21 | 14.2 |
| 815.2 | 1.33 | 5.59 | -- | -- | -- | -- | -- | 0.711 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 378.33 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 3 | 380.40 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 4 | 380.41 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 7 | 380.51 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 8 | 380.82 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 17 | 381.06 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 12 | 6 |
| 21 | 381.17 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 22 | 381.25 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 33 | 381.49 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 42 | 381.70 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 71 | 382.23 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 80 | 382.42 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 12 | 7 |
| 85 | 382.49 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 4 |
| 92 | 382.61 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 143 | 383.30 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 162 | 383.60 | humidity | 90.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 187 | 384.07 | humidity | 90.0 | 43200 | < th | dose independent | sin | 17 | NA |
| 188 | 384.09 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 190 | 384.10 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 226 | 384.39 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 255 | 384.79 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 261 | 384.86 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 262 | 384.88 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 352 | 385.78 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 14 | NA |
| 389 | 386.02 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 18 | 6 |
| 521 | 386.64 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 530 | 386.67 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 643 | 387.17 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 647 | 387.17 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 683 | 387.32 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 12 |
| 697 | 387.40 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 717 | 387.51 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 12 | 17 |
| 719 | 387.52 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 729 | 387.52 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 20 |
| 750 | 387.56 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 10 |
| 802 | 387.68 | humidity | 90.0 | 43200 | > th | dose independent | no | NA | NA |
| 861 | 387.85 | radiation | 1.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 904 | 387.95 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 5 | 21 |
| 936 | 388.12 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 938 | 388.12 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 946 | 388.14 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 979 | 388.28 | humidity | 90.0 | 43200 | > th | dose dependent | no | NA | NA |
| 986 | 388.30 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 17 | 18 |
| 994 | 388.35 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 24 | 23 |