Os10g0119300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Actin-binding FH2 domain containing protein.
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Os10g0119300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Actin-binding FH2 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.82 | 0.252 | 11 | 0.234 | 1.1 | 0.0338 | 0.0513 | 2.02 | 0.181 | 8.79 | 20.92 | 6417 | -- | -- |
| 31.33 | 0.261 | 11.1 | 0.148 | 1.04 | -0.46 | 0.181 | -- | 0.133 | 8.75 | 14.01 | 44337 | -- | -- |
| 28.76 | 0.25 | 11 | 0.248 | 1.1 | 0.0297 | -- | 2.03 | 0.184 | 8.79 | 21.01 | 6414 | -- | -- |
| 30.66 | 0.258 | 11.1 | 0.17 | 1.09 | -0.575 | -- | -- | 0.134 | 8.78 | 14.54 | 47520 | -- | -- |
| 96.86 | 0.458 | 11 | 0.372 | -- | -0.0722 | -- | 2.03 | 0.25 | -- | 21.7 | 7845 | -- | -- |
| 35.08 | 0.278 | 11.1 | -0.332 | 1.1 | -- | 0.00278 | -- | -0.00862 | 8.79 | -- | -- | -- | -- |
| 35.08 | 0.277 | 11.1 | -0.332 | 1.1 | -- | -- | -- | -0.00862 | 8.79 | -- | -- | -- | -- |
| 98.55 | 0.462 | 11.1 | 0.185 | -- | -0.595 | -- | -- | 0.146 | -- | 14.4 | 47520 | -- | -- |
| 30.92 | 0.259 | 11.1 | -- | 1.09 | -0.463 | -- | -- | 0.0946 | 8.78 | 13.9 | 47520 | -- | -- |
| 103.4 | 0.475 | 11.1 | -0.331 | -- | -- | -- | -- | -0.000204 | -- | -- | -- | -- | -- |
| 37.98 | 0.288 | 11.1 | -- | 1.1 | -- | -- | -- | 0.0284 | 8.82 | -- | -- | -- | -- |
| 98.86 | 0.463 | 11.1 | -- | -- | -0.474 | -- | -- | 0.105 | -- | 14.05 | 47520 | -- | -- |
| 106.29 | 0.481 | 11.1 | -- | -- | -- | -- | -- | 0.0365 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.54 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 2 | 27.58 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 4 | 27.65 | humidity | 80 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 5 | 27.68 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 7 | 27.72 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 9 | 27.75 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 10 | 27.76 | humidity | 80 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 12 | 27.77 | humidity | 80 | 43200 | > th | dose independent | rect. | 2 | 7 |
| 18 | 27.85 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 34 | 27.89 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 46 | 27.90 | humidity | 80 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 68 | 27.92 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 70 | 27.92 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 71 | 27.92 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 82 | 27.92 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 92 | 27.93 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 130 | 27.94 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 131 | 27.94 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 169 | 27.96 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 18 | 17 |
| 172 | 27.97 | atmosphere | 1010 | 43200 | < th | dose independent | sin | 7 | NA |
| 175 | 27.97 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 192 | 27.97 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 18 | 17 |
| 199 | 27.97 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 200 | 27.97 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 205 | 27.98 | atmosphere | 1010 | 43200 | > th | dose independent | sin | 5 | NA |
| 209 | 27.98 | atmosphere | 1010 | 43200 | < th | dose independent | sin | 4 | NA |
| 238 | 27.98 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 4 | 15 |
| 245 | 27.98 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 3 | 16 |
| 259 | 27.98 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 3 | 20 |
| 270 | 27.98 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 276 | 27.99 | atmosphere | 1010 | 43200 | > th | dose independent | sin | 3 | NA |
| 308 | 27.99 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 6 | 13 |
| 378 | 28.00 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 411 | 28.00 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 7 | 12 |
| 418 | 28.00 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 483 | 28.00 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 22 | 21 |
| 520 | 28.01 | atmosphere | 1010 | 43200 | > th | dose independent | sin | 0 | NA |
| 522 | 28.01 | atmosphere | 1010 | 43200 | > th | dose independent | no | NA | NA |
| 524 | 28.01 | atmosphere | 1010 | 43200 | < th | dose independent | sin | 0 | NA |
| 526 | 28.01 | atmosphere | 1010 | 43200 | < th | dose independent | no | NA | NA |
| 527 | 28.01 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 622 | 28.01 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 6 | 22 |
| 654 | 28.02 | atmosphere | 1010 | 43200 | > th | dose independent | sin | 22 | NA |
| 658 | 28.02 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 790 | 28.03 | atmosphere | 1010 | 43200 | > th | dose independent | sin | 20 | NA |
| 794 | 28.03 | atmosphere | 1010 | 43200 | < th | dose independent | sin | 20 | NA |
| 879 | 28.03 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 888 | 28.04 | atmosphere | 1010 | 43200 | > th | dose independent | sin | 17 | NA |